Gene: Cc09_g00870

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc09_g00870
  • Transcript Identifier Cc09_g00870.1
  • Gene Type Coding gene
  • Location chr9 : 649267-654571 : positive

Gene Family Information

  • ID HOM05D003820
  • #Genes/#Species 181/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q5R761
  • UniProtKB Q53GS9
  • UniProtKB B9S3J3
  • UniProtKB I1L9D9
  • UniProtKB A5BFT1
  • UniProtKB Q3TIX9
  • id GSCOCG00017889001

Descriptions

  • Description Putative U4/U6.U5 tri-snRNP-associated protein 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000245
IEA
InterProspliceosomal complex assembly
GO:0006397
IEA
InterPromRNA processing
GO:0016579
IEA
InterProprotein deubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D003820

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR033809 USP39
IPR038765 Papain-like cysteine peptidase superfamily
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Mapman id Description
16.2.1.5.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39)