Gene: Cpa.g.sc109.41
General Information
Structural Information
- Species Carica papaya
- Gene Identifier Cpa.g.sc109.41
- Transcript Identifier Cpa.t.sc109.41
- Gene Type Coding gene
- Location supercontig_109 : 850105-853736 : negative
Gene Family Information
- ID HOM05D003820
- #Genes/#Species 181/97
- Phylogenetic origin
- ID ORTHO05D004540
- #Genes/#Species 177/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 16405557
- tid PAC:16405557
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016579 | ISO | PLAZA Homology (enrichment) | protein deubiquitination | HOM05D003820 |
| GO:0006397 | ISO | PLAZA Homology (enrichment) | mRNA processing | HOM05D003820 |
| GO:0000245 | ISO | PLAZA Homology (enrichment) | spliceosomal complex assembly | HOM05D003820 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0004843 | ISO | PLAZA Homology (enrichment) | thiol-dependent deubiquitinase | HOM05D003820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.5.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39) |