Gene: AUR62012795

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62012795
Transcript Identifier AUR62012795-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_2715 : 4180577-4185877 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003820
#Genes/#Species 181/97
Phylogenetic origin

ID ORTHO05D004540
#Genes/#Species 177/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62012795.v1.0
pacid 36299842

Descriptions

Short descriptions
Ortholog descriptions

Description Usp39: U4/U6.U5 tri-snRNP-associated protein 2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016579	IEA	InterPro	protein deubiquitination
GO:0000245	IEA	InterPro	spliceosomal complex assembly
GO:0006397	IEA	InterPro	mRNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004843	IEA	InterPro	thiol-dependent deubiquitinase

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001607	Zinc finger, UBP-type
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765	Papain-like cysteine peptidase superfamily
IPR033809	USP39
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
16.2.1.5.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39)