Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13220 Brassica napus
A07p32820 Brassica napus
Aa31LG2G2460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis
Actinidia13524 Actinidia chinensis
Actinidia15138 Actinidia chinensis
Actinidia15139 Actinidia chinensis
Actinidia15141 Actinidia chinensis
Actinidia15142 Actinidia chinensis
Actinidia17864 Actinidia chinensis
Actinidia17865 Actinidia chinensis
Actinidia18716 Actinidia chinensis
Actinidia18719 Actinidia chinensis
Actinidia18720 Actinidia chinensis
Actinidia18722 Actinidia chinensis
Actinidia28693 Actinidia chinensis
Actinidia30423 Actinidia chinensis
Actinidia37853 Actinidia chinensis
Actinidia38202 Actinidia chinensis
Ah.04g150530 Amaranthus hybridus
AL2G12170 Arabidopsis lyrata
AL2G22130 Arabidopsis lyrata
Aqoxy1G00051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9YYL5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea
AT1G63210 Arabidopsis thaliana
AT1G65440 Arabidopsis thaliana
ATR0782G064 Amborella trichopoda
Atru.chr1.1380 Acer truncatum
AUR62018416 Chenopodium quinoa
AUR62041298 Chenopodium quinoa
BcaB05g24114 Brassica carinata
BcaC03g14705 Brassica carinata
BcaNung05532 Brassica carinata
BcaNung05952 Brassica carinata
BolC2t07860H Brassica oleracea
BolC2t08277H Brassica oleracea
BolC6t38997H Brassica oleracea
BraA02t06378Z Brassica rapa
BraA07t30909Z Brassica rapa
C02p17450 Brassica napus
C02p17460 Brassica napus
C02p21400 Brassica napus
C06p39050 Brassica napus
CAN.G128.94 Capsicum annuum
CANSAT64G1505 Cannabis sativa
CARHR057100 Cardamine hirsuta
Carub.0001s4195 Capsella rubella
Carub.0002s0163 Capsella rubella
Carub.0002s1117 Capsella rubella
Ca_08696_v3 Cicer arietinum L.
Ca_12390_v3 Cicer arietinum L.
CBR_g876 Chara braunii
CBR_g879 Chara braunii
Cc06_g21410 Coffea canephora
CDE08G0416 Ceratophyllum demersum
CDE08G1380 Ceratophyllum demersum
CDE09G0935 Ceratophyllum demersum
CDE09G1137 Ceratophyllum demersum
Cfa022608 Carpinus fangiana
Ciclev10013566m.g Citrus clementina
CiPaw.09G052100 Carya illinoinensis
ClCG11G010450 Citrullus lanatus
COL.COLO4_04288 Corchorus olitorius
COL.COLO4_10242 Corchorus olitorius
COL.COLO4_25705 Corchorus olitorius
COL.COLO4_25706 Corchorus olitorius
COL.COLO4_28009 Corchorus olitorius
Cpa.g.sc1617.1 Carica papaya
Cre09.g403182 Chlamydomonas reinhardtii
CsaV3_2G009910 Cucumis sativus L.
CSS0028254 Camellia sinensis var. sinensis
DCAR_013529 Daucus carota
DCAR_020604 Daucus carota
DCAR_029069 Daucus carota
Dinv10811 Davidia involucrata
Dinv13151 Davidia involucrata
Dinv13155 Davidia involucrata
Duzib106G1211 Durio zibethinus
Duzib114G0695 Durio zibethinus
ECA236G0767 Erigeron canadensis
ECA236G1109 Erigeron canadensis
ECA236G2013 Erigeron canadensis
ECA236G4010 Erigeron canadensis
ECA247G4078 Erigeron canadensis
EL10Ac3g07304 Beta vulgaris
Eucgr.K01682 Eucalyptus grandis
FAN17G2986 Fragaria x ananassa
FAN19G1577 Fragaria x ananassa
FAN19G2288 Fragaria x ananassa
FAN19G3161 Fragaria x ananassa
FAN23G0365 Fragaria x ananassa
FAN23G1026 Fragaria x ananassa
FAN23G1577 Fragaria x ananassa
FAN23G1939 Fragaria x ananassa
FAN23G2835 Fragaria x ananassa
FAN26G1225 Fragaria x ananassa
FAN26G2883 Fragaria x ananassa
FAN26G3239 Fragaria x ananassa
FAN28G1238 Fragaria x ananassa
FAN28G1503 Fragaria x ananassa
FAN28G2183 Fragaria x ananassa
FAN28G2687 Fragaria x ananassa
FAN28G2934 Fragaria x ananassa
FvH4_1g02480 Fragaria vesca
FvH4_1g02481 Fragaria vesca
FvH4_1g02810 Fragaria vesca
FvH4_1g29220 Fragaria vesca
Glyma.03G121000 Glycine max
Glyma.04G126400 Glycine max
Glyma.06G312200 Glycine max
Glyma.19G125600 Glycine max
Glyma.20G114933 Glycine max
Gohir.A05G396600 Gossypium hirsutum
Gohir.A06G172600 Gossypium hirsutum
Gohir.A10G191700 Gossypium hirsutum
Gohir.A11G138500 Gossypium hirsutum
Gohir.A11G197584 Gossypium hirsutum
Gohir.A12G078700 Gossypium hirsutum
Gohir.A13G111550 Gossypium hirsutum
Gohir.D06G092900 Gossypium hirsutum
Gohir.D06G181500 Gossypium hirsutum
Gohir.D10G199500 Gossypium hirsutum
Gorai.009G435500 Gossypium raimondii
Gorai.010G107400 Gossypium raimondii
Gorai.010G212900 Gossypium raimondii
Gorai.011G223600 Gossypium raimondii
GSVIVG01012364001 Vitis vinifera
GSVIVG01012377001 Vitis vinifera
GSVIVG01012381001 Vitis vinifera
GSVIVG01025815001 Vitis vinifera
HanXRQChr04g0125591 Helianthus annuus
HanXRQChr06g0177131 Helianthus annuus
HanXRQChr10g0298481 Helianthus annuus
HanXRQChr15g0486251 Helianthus annuus
Haze_20287 Corylus avellana
HPP92_011267 Vanilla planifolia
HPP92_011268 Vanilla planifolia
HPP92_011269 Vanilla planifolia
HPP92_011270 Vanilla planifolia
HPP92_011291 Vanilla planifolia
Hund00908 Selenicereus undatus
Hund08680 Selenicereus undatus
Hund19066 Selenicereus undatus
Lalb_Chr14g0365421 Lupinus albus
Lalb_Chr15g0079261 Lupinus albus
Lalb_Chr24g0400581 Lupinus albus
Lj1C1081G2 Lonicera japonica
Lj1g0022797 Lotus japonicus
Lj2C412G3 Lonicera japonica
Lj3g0013532 Lotus japonicus
Lj9C650G10 Lonicera japonica
Lsat_1_v5_gn_4_43821 Lactuca sativa
Lsat_1_v5_gn_5_8441 Lactuca sativa
Lsat_1_v5_gn_8_83860 Lactuca sativa
Lsat_1_v5_gn_9_32200 Lactuca sativa
Manes.04G154475 Manihot esculenta
Manes.08G162401 Manihot esculenta
Mapoly0025s0106 Marchantia polymorpha
MBI02_g14198_MAGBIO Magnolia biondii
MBI11_g01739_MAGBIO Magnolia biondii
MBI13_g02373_MAGBIO Magnolia biondii
MBI15_g14060_MAGBIO Magnolia biondii
MBI18_g20235_MAGBIO Magnolia biondii
MBI19_g22500_MAGBIO Magnolia biondii
MBI19_g22501_MAGBIO Magnolia biondii
MBI19_g32641_MAGBIO Magnolia biondii
MBI19_g32642_MAGBIO Magnolia biondii
MBI19_g32643_MAGBIO Magnolia biondii
MBI19_g32644_MAGBIO Magnolia biondii
MBI19_g47879_MAGBIO Magnolia biondii
MCO05G283 Micromonas commoda
MD00G1025500 Malus domestica
MD00G1108000 Malus domestica
MD10G1173400 Malus domestica
Medtr7g087460 Medicago truncatula
Medtr7g087475 Medicago truncatula
Medtr7g088700 Medicago truncatula
MELO3C008653.2 Cucumis melo
Migut.J01544 Erythranthe guttata
Migut.J01553 Erythranthe guttata
MSTRG.6300 Avicennia marina
Nitab4.5_0000062g0270 Nicotiana tabacum
Nitab4.5_0003225g0040 Nicotiana tabacum
Nn7g37023 Nelumbo nucifera
Oeu022996.1 Olea europaea
Oeu033716.1 Olea europaea
Oeu044234.2 Olea europaea
Os05g0494900 Oryza sativa ssp. japonica
Peaxi162Scf00601g00007 Petunia axillaris
PGR142G0829 Punica granatum
PGSC0003DMG400028197 Solanum tuberosum
Phvul.001G117200 Phaseolus vulgaris
Phvul.005G013600 Phaseolus vulgaris
Potri.001G034300 Populus trichocarpa
Potri.006G031900 Populus trichocarpa
Potri.016G029200 Populus trichocarpa
Pp3c5_23930 Physcomitrium patens
Pp3c5_24480 Physcomitrium patens
PRCOL_00004004 Prasinoderma coloniale
Prupe.7G019900 Prunus persica
Prupe.8G211800 Prunus persica
Psat0s699g0040 Pisum sativum
Psat0s699g0080 Pisum sativum
Psat3g019400 Pisum sativum
Psat5g224720 Pisum sativum
PSO339G4261 Papaver somniferum
PSO384G3455 Papaver somniferum
QL01p002119 Quercus lobata
QL04p022161 Quercus lobata
QL04p022175 Quercus lobata
QL07p013799 Quercus lobata
QL07p013828 Quercus lobata
RcHm_v2.0_Chr2g0087471 Rosa chinensis
RcHm_v2.0_Chr2g0087481 Rosa chinensis
RcHm_v2.0_Chr2g0087901 Rosa chinensis
RcHm_v2.0_Chr2g0087911 Rosa chinensis
RcHm_v2.0_Chr2g0087921 Rosa chinensis
RcHm_v2.0_Chr2g0087931 Rosa chinensis
RcHm_v2.0_Chr3g0494601 Rosa chinensis
RcHm_v2.0_Chr6g0275851 Rosa chinensis
RcHm_v2.0_Chr6g0275861 Rosa chinensis
Rhsim04G0118000 Rhododendron simsii
Sabra06G0021300 Salix brachista
Sabra16G0033200 Salix brachista
SalBow6G2030 Salvia bowleyana
Sc19g0007910 Simmondsia chinensis
Sed0027584 Sechium edule
SEGI_00617 Sequoiadendron giganteum
SEGI_15393 Sequoiadendron giganteum
SEGI_17703 Sequoiadendron giganteum
SEGI_20723 Sequoiadendron giganteum
SEGI_22762 Sequoiadendron giganteum
SEGI_33833 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22308 Striga asiatica
SHI11341 Sapria himalayana
SMO364G0195 Selaginella moellendorffii
Solyc10g081020.2 Solanum lycopersicum
Sopen10g031530 Solanum pennellii
Sp2g01330 Schrenkiella parvula
Sp5g20200 Schrenkiella parvula
TAR623G0852 Trochodendron aralioides
THA.LOC104805690 Tarenaya hassleriana
Thecc.10G133700 Theobroma cacao
Thecc.10G136200 Theobroma cacao
Thhalv10012314m.g Eutrema salsugineum
Thhalv10018001m.g Eutrema salsugineum
TPR.G22729 Trifolium pratense
TPR.G25549 Trifolium pratense
TPR.G26612 Trifolium pratense
TPR.G30283 Trifolium pratense
TPR.G30407 Trifolium pratense
TWI53G2001 Tripterygium wilfordii
TWI77G0284 Tripterygium wilfordii
unitig_21.g20682 Utricularia gibba
vmacro08975 Vaccinium macrocarpon
VMungo1080G1740 Vigna mungo
VMungo1383G1765 Vigna mungo
Zm00001eb291590 Zea mays

User provided reference genes

Program Settings