Gene: FvH4_1g02480

General Information

Structural Information

  • Species Fragaria vesca
  • Gene Identifier FvH4_1g02480
  • Transcript Identifier FvH4_1g02480.t1
  • Gene Type Coding gene
  • Location Fvb1 : 1381680-1384923 : positive

Gene Family Information

  • ID HOM05D002640
  • #Genes/#Species 260/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id FvH4_1g02480.v4.0.a2
  • pacid 50692837

Descriptions

  • Description PF14635//PF14639 - Helix-hairpin-helix motif (HHH_7) // Holliday-junction resolvase-like of SPT6 (YqgF)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032968
IEA
InterPropositive regulation of transcription elongation from RNA polymerase II promoter
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G63210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G65440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G65440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017072 Transcription elongation factor Spt6
IPR012337 Ribonuclease H-like superfamily
IPR037027 YqgF/RNase H-like domain superfamily
IPR028231 Transcription elongation factor Spt6, YqgF domain
IPR032706 Transcription elongation factor Spt6, helix-hairpin-helix motif
IPR023323 Tex-like domain superfamily
IPR023319 Tex-like protein, HTH domain superfamily
Mapman id Description
15.3.5.4.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT6-IWS1 transcription elongation complex.component SPT6