Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27640 Brassica napus
A03p50220 Brassica napus
A04p17670 Brassica napus
A06p10690 Brassica napus
A08p31890 Brassica napus
A10p30060 Brassica napus
Aa31LG1G18300 Aethionema arabicum
Aa31LG6G11580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2665 Anthoceros agrestis
Actinidia05385 Actinidia chinensis
Actinidia06681 Actinidia chinensis
Actinidia27174 Actinidia chinensis
Actinidia27175 Actinidia chinensis
Ah.13g068590 Amaranthus hybridus
Ah.15g095630 Amaranthus hybridus
AL1G26610 Arabidopsis lyrata
AL1G30400 Arabidopsis lyrata
AL1G39710 Arabidopsis lyrata
AL1G48800 Arabidopsis lyrata
AL5G17020 Arabidopsis lyrata
AL6G16600 Arabidopsis lyrata
AL6G17020 Arabidopsis lyrata
AL6G21150 Arabidopsis lyrata
AL6G23490 Arabidopsis lyrata
AL7G39860 Arabidopsis lyrata
AL7G39900 Arabidopsis lyrata
Aqoxy5G03555 Aquilegia oxysepala
Aqoxy7G03613 Aquilegia oxysepala
AT1G14640 Arabidopsis thaliana
AT1G14650 Arabidopsis thaliana
AT3G27600 Arabidopsis thaliana
AT4G16200 Arabidopsis thaliana
AT5G06520 Arabidopsis thaliana
AT5G06890 Arabidopsis thaliana
AT5G12280 Arabidopsis thaliana
ATR0618G341 Amborella trichopoda
Atru.chr12.1111 Acer truncatum
Atru.chr12.1112 Acer truncatum
Atru.chr4.1090 Acer truncatum
AUR62002723 Chenopodium quinoa
AUR62002724 Chenopodium quinoa
AUR62012173 Chenopodium quinoa
AUR62012853 Chenopodium quinoa
AUR62022810 Chenopodium quinoa
BcaB01g02923 Brassica carinata
BcaB02g06534 Brassica carinata
BcaB03g13089 Brassica carinata
BcaB03g13525 Brassica carinata
BcaC01g04832 Brassica carinata
BcaC02g08568 Brassica carinata
BcaC03g18482 Brassica carinata
BcaC05g25379 Brassica carinata
BcaC05g25380 Brassica carinata
BcaC05g25382 Brassica carinata
BcaC07g38683 Brassica carinata
BcaC07g38750 Brassica carinata
BcaC07g40443 Brassica carinata
BcaNung05662 Brassica carinata
BcaNung05663 Brassica carinata
BcaNung05664 Brassica carinata
BolC3t15657H Brassica oleracea
BolC4t26816H Brassica oleracea
BolC4t26819H Brassica oleracea
BolC5t30004H Brassica oleracea
BolC8t49118H Brassica oleracea
BolC8t49302H Brassica oleracea
BolC9t59793H Brassica oleracea
BraA03t11977Z Brassica rapa
BraA04t17386Z Brassica rapa
BraA06t24251Z Brassica rapa
BraA08t35110Z Brassica rapa
BraA10t45046Z Brassica rapa
C02p08210 Brassica napus
C03p33350 Brassica napus
C04p52400 Brassica napus
C04p52410 Brassica napus
C05p12600 Brassica napus
C07p48410 Brassica napus
C08p14840 Brassica napus
C08p16810 Brassica napus
C09p70470 Brassica napus
CAN.G150.2 Capsicum annuum
CAN.G809.36 Capsicum annuum
CARHR015140 Cardamine hirsuta
CARHR081890 Cardamine hirsuta
CARHR081900 Cardamine hirsuta
CARHR221320 Cardamine hirsuta
CARHR222290 Cardamine hirsuta
Carub.0001s1440 Capsella rubella
Carub.0001s1441 Capsella rubella
Carub.0006s0564 Capsella rubella
Carub.0006s0760 Capsella rubella
Carub.0006s0761 Capsella rubella
Carub.0007s2532 Capsella rubella
Carub.0007s2621 Capsella rubella
Ca_23469_v3 Cicer arietinum L.
CBR_g33984 Chara braunii
Cc00_g29290 Coffea canephora
Cc00_g35870 Coffea canephora
Cc09_g04870 Coffea canephora
Cc09_g04890 Coffea canephora
Cc09_g04900 Coffea canephora
CDE02G3426 Ceratophyllum demersum
Cfa010375 Carpinus fangiana
Cfa024090 Carpinus fangiana
Ciclev10014300m.g Citrus clementina
CiPaw.05G038700 Carya illinoinensis
ClCG06G002870 Citrullus lanatus
ClCG11G007770 Citrullus lanatus
COL.COLO4_27671 Corchorus olitorius
Cpa.g.sc1346.2 Carica papaya
Cpa.g.sc1346.3 Carica papaya
Cre06.g307450 Chlamydomonas reinhardtii
CsaV3_2G033800 Cucumis sativus L.
CSS0003265 Camellia sinensis var. sinensis
CSS0036069 Camellia sinensis var. sinensis
DCAR_004347 Daucus carota
DCAR_009016 Daucus carota
Dinv05869 Davidia involucrata
Dinv31273 Davidia involucrata
Duzib248G1457 Durio zibethinus
Duzib251G0736 Durio zibethinus
ECA233G2844 Erigeron canadensis
ECA233G5663 Erigeron canadensis
ECA247G2788 Erigeron canadensis
EL10Ac2g04712 Beta vulgaris
Eucgr.J00854 Eucalyptus grandis
FAN04G1383 Fragaria x ananassa
FAN07G2380 Fragaria x ananassa
FAN08G0321 Fragaria x ananassa
FAN12G4354 Fragaria x ananassa
FAN13G0003 Fragaria x ananassa
FAN17G0285 Fragaria x ananassa
FAN18G4310 Fragaria x ananassa
FAN22G1544 Fragaria x ananassa
FvH4_4g07440 Fragaria vesca
FvH4_5g06370 Fragaria vesca
Glyma.09G007700 Glycine max
Glyma.10G264400 Glycine max
Glyma.15G173200 Glycine max
Glyma.20G126000 Glycine max
Gohir.A03G110200 Gossypium hirsutum
Gohir.D02G134800 Gossypium hirsutum
Gorai.005G150700 Gossypium raimondii
GSVIVG01012058001 Vitis vinifera
GSVIVG01012061001 Vitis vinifera
GSVIVG01019309001 Vitis vinifera
HanXRQChr03g0079451 Helianthus annuus
HanXRQChr11g0345831 Helianthus annuus
HanXRQChr17g0538361 Helianthus annuus
HanXRQChr17g0538371 Helianthus annuus
Haze_03325 Corylus avellana
HPP92_018925 Vanilla planifolia
HPP92_018926 Vanilla planifolia
HPP92_018927 Vanilla planifolia
HPP92_018934 Vanilla planifolia
HPP92_018935 Vanilla planifolia
Hund24438 Selenicereus undatus
Lalb_Chr02g0145401 Lupinus albus
Lalb_Chr02g0145421 Lupinus albus
Lalb_Chr02g0145431 Lupinus albus
Lalb_Chr02g0145441 Lupinus albus
Lalb_Chr02g0145451 Lupinus albus
Lalb_Chr06g0165601 Lupinus albus
Lj1A1151T81 Lonicera japonica
Lj2g0011534 Lotus japonicus
Lj3g0008201 Lotus japonicus
Lj5g0011873 Lotus japonicus
Lj5g0018790 Lotus japonicus
Lsat_1_v5_gn_6_65541 Lactuca sativa
Manes.04G066600 Manihot esculenta
Mapoly0053s0014 Marchantia polymorpha
Mapoly0053s0080 Marchantia polymorpha
MBI03_g24017_MAGBIO Magnolia biondii
MBI03_g47333_MAGBIO Magnolia biondii
MCO06G134 Micromonas commoda
MD05G1356000 Malus domestica
MD05G1356100 Malus domestica
MD05G1356200 Malus domestica
MD10G1329300 Malus domestica
MD10G1329400 Malus domestica
MD13G1244100 Malus domestica
MD16G1250800 Malus domestica
MD16G1250900 Malus domestica
Medtr7g063860 Medicago truncatula
Medtr8g106170 Medicago truncatula
MELO3C008151.2 Cucumis melo
Migut.B01299 Erythranthe guttata
Migut.N00900 Erythranthe guttata
MSTRG.7588 Avicennia marina
MSTRG.7590 Avicennia marina
Nitab4.5_0000646g0320 Nicotiana tabacum
Nitab4.5_0000688g0290 Nicotiana tabacum
Nitab4.5_0002162g0020 Nicotiana tabacum
Nitab4.5_0002208g0020 Nicotiana tabacum
Nitab4.5_0002805g0060 Nicotiana tabacum
Nn7g37178 Nelumbo nucifera
Oeu023297.1 Olea europaea
Oeu025252.1 Olea europaea
Oeu046918.1 Olea europaea
Os02g0245000 Oryza sativa ssp. japonica
Peaxi162Scf00036g00164 Petunia axillaris
Peaxi162Scf00036g01621 Petunia axillaris
Peaxi162Scf00420g00339 Petunia axillaris
PGR044G2151 Punica granatum
PGSC0003DMG400002827 Solanum tuberosum
PGSC0003DMG400007322 Solanum tuberosum
Phvul.007G037600 Phaseolus vulgaris
Potri.005G094600 Populus trichocarpa
Potri.007G070700 Populus trichocarpa
Pp3c18_11660 Physcomitrium patens
Pp3c23_15260 Physcomitrium patens
PRCOL_00002654 Prasinoderma coloniale
Prupe.1G077400 Prunus persica
Prupe.3G079300 Prunus persica
Prupe.3G162200 Prunus persica
Psat7g003760 Pisum sativum
Psat7g089360 Pisum sativum
QL09p022988 Quercus lobata
RcHm_v2.0_Chr1g0364581 Rosa chinensis
RcHm_v2.0_Chr1g0364591 Rosa chinensis
RcHm_v2.0_Chr4g0399901 Rosa chinensis
RcHm_v2.0_Chr7g0191091 Rosa chinensis
RcHm_v2.0_Chr7g0192451 Rosa chinensis
RcHm_v2.0_Chr7g0192471 Rosa chinensis
Rhsim03G0093900 Rhododendron simsii
Sabra05G0078300 Salix brachista
Sabra07G0059400 Salix brachista
Sabra18G0043400 Salix brachista
SalBow8G2582 Salvia bowleyana
Sc21g0005370 Simmondsia chinensis
Sed0006467 Sechium edule
SEGI_06729 Sequoiadendron giganteum
SEGI_11496 Sequoiadendron giganteum
SGA_v2.0_scaffold423G51465 Striga asiatica
SHI18003 Sapria himalayana
SMO116G0104 Selaginella moellendorffii
SMO364G0668 Selaginella moellendorffii
Solyc02g081960.3 Solanum lycopersicum
Solyc04g005690.4 Solanum lycopersicum
Sopen02g026590 Solanum pennellii
Sopen04g001740 Solanum pennellii
Sp1g13010 Schrenkiella parvula
TAR371G1001 Trochodendron aralioides
THA.LOC104801765 Tarenaya hassleriana
Thecc.02G311700 Theobroma cacao
Thhalv10006856m.g Eutrema salsugineum
Thhalv10013875m.g Eutrema salsugineum
Thhalv10014821m.g Eutrema salsugineum
Thhalv10015432m.g Eutrema salsugineum
Thhalv10016290m.g Eutrema salsugineum
Thhalv10023046m.g Eutrema salsugineum
Thhalv10027083m.g Eutrema salsugineum
Thhalv10027567m.g Eutrema salsugineum
TPR.G12859 Trifolium pratense
TPR.G26451 Trifolium pratense
TWI74G1222 Tripterygium wilfordii
unitig_37.g12045 Utricularia gibba
unitig_92.g28193 Utricularia gibba
vmacro07278 Vaccinium macrocarpon
VMungo0720G1145 Vigna mungo
Zm00001eb128190 Zea mays
Zm00001eb333220 Zea mays

User provided reference genes

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