Gene: PGR044G2151

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G2151
  • Transcript Identifier PGR044G2151.02
  • Gene Type Coding gene
  • Location NC_045134.1 : 257384-259897 : negative

Gene Family Information

  • ID HOM05D002594
  • #Genes/#Species 263/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031371671.1
  • name LOC116187183
  • name XM_031515811.1
  • id gene-LOC116187183
  • uniprot A0A218VT88

Descriptions

  • product probable splicing factor 3A subunit 1, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0045292
IEA
GOA DatabasemRNA cis splicing, via spliceosome
GO:0045292
IEA
InterPromRNA cis splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR035563 Splicing factor 3A subunit 1, ubiquitin domain
IPR035967 SWAP/Surp superfamily
IPR029071 Ubiquitin-like domain superfamily
IPR022030 Splicing factor 3A subunit 1, conserved domain
IPR000061 SWAP/Surp
IPR045146 Splicing factor 3A subunit 1
Mapman id Description
16.2.1.2.3.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A1