Gene: Cc00_g29290
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g29290
- Transcript Identifier Cc00_g29290.1
- Gene Type Coding gene
- Location chr0 : 180382604-180384026 : positive
Gene Family Information
- ID HOM05D002594
- #Genes/#Species 263/96
- Phylogenetic origin
- ID ORTHO05D003499
- #Genes/#Species 220/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB I1NFU9
- UniProtKB Q15459
- UniProtKB I1MHB4
- UniProtKB A2VDN6
- UniProtKB F6HFR3
- UniProtKB Q8RXF1
- id GSCOCG00004235001
Descriptions
- Description Probable splicing factor 3A subunit 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D002594 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.2.3.1 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A1 |