Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06690 Brassica napus
A03p00790 Brassica napus
A04p10900 Brassica napus
A07p33280 Brassica napus
A10p17160 Brassica napus
A10p33110 Brassica napus
Aa31LG1G12080 Aethionema arabicum
Aa31LG1G22270 Aethionema arabicum
Aa31LG2G2970 Aethionema arabicum
Aa31LG2G2980 Aethionema arabicum
Aa31LG9G17400 Aethionema arabicum
Aa31LG9G17410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.239 Anthoceros agrestis
Actinidia02965 Actinidia chinensis
Actinidia06494 Actinidia chinensis
Actinidia23956 Actinidia chinensis
Actinidia26446 Actinidia chinensis
Actinidia28808 Actinidia chinensis
Actinidia33857 Actinidia chinensis
Actinidia35730 Actinidia chinensis
Ah.03g137870 Amaranthus hybridus
Ah.08g219080 Amaranthus hybridus
AL2G24000 Arabidopsis lyrata
AL6G11790 Arabidopsis lyrata
AL7G46560 Arabidopsis lyrata
AL8G36520 Arabidopsis lyrata
Aqoxy3G00046 Aquilegia oxysepala
Aqoxy4G02984 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4ZTL4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.573ERA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BPMY5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CV46RI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8UVUT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GS5YLT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9T28S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TW95YI Arachis hypogaea
AT1G66260 Arabidopsis thaliana
AT5G02530 Arabidopsis thaliana
AT5G37720 Arabidopsis thaliana
AT5G59950 Arabidopsis thaliana
ATR0559G283 Amborella trichopoda
ATR0564G513 Amborella trichopoda
Atru.chr1.1927 Acer truncatum
Atru.chr12.507 Acer truncatum
Atru.chr3.3837 Acer truncatum
Atru.chr8.1942 Acer truncatum
AUR62001823 Chenopodium quinoa
AUR62002917 Chenopodium quinoa
AUR62009610 Chenopodium quinoa
AUR62035276 Chenopodium quinoa
BcaB01g06171 Brassica carinata
BcaB01g06189 Brassica carinata
BcaB03g15276 Brassica carinata
BcaB06g27126 Brassica carinata
BcaB08g35074 Brassica carinata
BcaB08g36207 Brassica carinata
BcaC01g01338 Brassica carinata
BcaC02g09607 Brassica carinata
BcaC04g19651 Brassica carinata
BcaC06g31995 Brassica carinata
BcaC08g46069 Brassica carinata
BcaNung02137 Brassica carinata
BolC2t07298H Brassica oleracea
BolC3t12665H Brassica oleracea
BolC4t26038H Brassica oleracea
BolC6t39054H Brassica oleracea
BolC9t58113H Brassica oleracea
BolC9t60138H Brassica oleracea
BraA03t09462Z Brassica rapa
BraA04t16756Z Brassica rapa
BraA07t30959Z Brassica rapa
BraA10t43798Z Brassica rapa
BraA10t45344Z Brassica rapa
C02p11980 Brassica napus
C03p01040 Brassica napus
C04p44650 Brassica napus
C06p39610 Brassica napus
C09p52460 Brassica napus
C09p74070 Brassica napus
CAN.G501.13 Capsicum annuum
CAN.G649.10 Capsicum annuum
CANSAT54G2283 Cannabis sativa
CANSAT64G0472 Cannabis sativa
CARHR058200 Cardamine hirsuta
CARHR210830 Cardamine hirsuta
CARHR215120 Cardamine hirsuta
CARHR273580 Cardamine hirsuta
Carub.0002s1226 Capsella rubella
Carub.0006s0133 Capsella rubella
Carub.0007s3288 Capsella rubella
Carub.0008s2050 Capsella rubella
Ca_00993_v3 Cicer arietinum L.
Ca_07233_v3 Cicer arietinum L.
Ca_11548_v3 Cicer arietinum L.
Ca_17103_v3 Cicer arietinum L.
Ca_19185_v3 Cicer arietinum L.
Ca_23460_v3 Cicer arietinum L.
Ca_30889_v3 Cicer arietinum L.
CBR_g28521 Chara braunii
Cc01_g12490 Coffea canephora
Cc02_g08170 Coffea canephora
Cc07_g13450 Coffea canephora
CDE02G2164 Ceratophyllum demersum
CDE04G2525 Ceratophyllum demersum
CDE05G1111 Ceratophyllum demersum
CDE05G2123 Ceratophyllum demersum
CDE07G1326 Ceratophyllum demersum
CDE08G1666 Ceratophyllum demersum
Cfa001506 Carpinus fangiana
Cfa007813 Carpinus fangiana
Cfa011463 Carpinus fangiana
Cfa022903 Carpinus fangiana
Cfa025580 Carpinus fangiana
Ciclev10012354m.g Citrus clementina
Ciclev10012530m.g Citrus clementina
Ciclev10029160m.g Citrus clementina
Ciclev10032532m.g Citrus clementina
CiPaw.01G284200 Carya illinoinensis
CiPaw.02G182200 Carya illinoinensis
CiPaw.03G071900 Carya illinoinensis
CiPaw.04G047400 Carya illinoinensis
CiPaw.13G097800 Carya illinoinensis
CiPaw.14G071000 Carya illinoinensis
ClCG02G020360 Citrullus lanatus
ClCG03G001960 Citrullus lanatus
ClCG05G011470 Citrullus lanatus
COL.COLO4_14838 Corchorus olitorius
COL.COLO4_14969 Corchorus olitorius
COL.COLO4_18470 Corchorus olitorius
COL.COLO4_32267 Corchorus olitorius
Cpa.g.sc1111.1 Carica papaya
Cpa.g.sc188.9 Carica papaya
Cpa.g.sc190.14 Carica papaya
Cre10.g462250 Chlamydomonas reinhardtii
CsaV3_1G033610 Cucumis sativus L.
CsaV3_3G020960 Cucumis sativus L.
CsaV3_6G017140 Cucumis sativus L.
CSS0004312 Camellia sinensis var. sinensis
CSS0011715 Camellia sinensis var. sinensis
CSS0018018 Camellia sinensis var. sinensis
CSS0022007 Camellia sinensis var. sinensis
CSS0023231 Camellia sinensis var. sinensis
CSS0023529 Camellia sinensis var. sinensis
CSS0030576 Camellia sinensis var. sinensis
CSS0032759 Camellia sinensis var. sinensis
CSS0037347 Camellia sinensis var. sinensis
CSS0039364 Camellia sinensis var. sinensis
CSS0041558 Camellia sinensis var. sinensis
CSS0042919 Camellia sinensis var. sinensis
DCAR_005314 Daucus carota
DCAR_014840 Daucus carota
DCAR_016689 Daucus carota
DCAR_027660 Daucus carota
Dinv19035 Davidia involucrata
Dinv25989 Davidia involucrata
Dinv28203 Davidia involucrata
Dinv31434 Davidia involucrata
Dinv32869 Davidia involucrata
Dinv35625 Davidia involucrata
Dinv37195 Davidia involucrata
Duzib106G1891 Durio zibethinus
Duzib128G1580 Durio zibethinus
Duzib150G1022 Durio zibethinus
Duzib168G0023 Durio zibethinus
Duzib187G1750 Durio zibethinus
Duzib268G1557 Durio zibethinus
ECA233G2531 Erigeron canadensis
ECA236G4565 Erigeron canadensis
ECA238G1431 Erigeron canadensis
ECA238G3179 Erigeron canadensis
EL10Ac7g15977 Beta vulgaris
Eucgr.B02389 Eucalyptus grandis
Eucgr.G02919 Eucalyptus grandis
Eucgr.J01600 Eucalyptus grandis
FAN11G0606 Fragaria x ananassa
FAN16G3619 Fragaria x ananassa
FAN19G0788 Fragaria x ananassa
FAN21G3131 Fragaria x ananassa
FAN23G1681 Fragaria x ananassa
FAN25G3302 Fragaria x ananassa
FAN26G1535 Fragaria x ananassa
FvH4_1g28810 Fragaria vesca
FvH4_3g35460 Fragaria vesca
Glyma.02G093700 Glycine max
Glyma.11G141500 Glycine max
Glyma.11G216200 Glycine max
Glyma.12G064900 Glycine max
Glyma.13G334200 Glycine max
Glyma.14G168000 Glycine max
Glyma.18G040400 Glycine max
Glyma.18G288400 Glycine max
Gohir.A01G101100 Gossypium hirsutum
Gohir.A03G039600 Gossypium hirsutum
Gohir.A05G350000 Gossypium hirsutum
Gohir.A07G096200 Gossypium hirsutum
Gohir.A08G000177 Gossypium hirsutum
Gohir.A13G228200 Gossypium hirsutum
Gohir.D01G086000 Gossypium hirsutum
Gohir.D03G128500 Gossypium hirsutum
Gohir.D04G062500 Gossypium hirsutum
Gohir.D07G100600 Gossypium hirsutum
Gohir.D13G233800 Gossypium hirsutum
Gorai.001G108500 Gossypium raimondii
Gorai.002G111400 Gossypium raimondii
Gorai.003G135200 Gossypium raimondii
Gorai.004G004300 Gossypium raimondii
Gorai.012G069800 Gossypium raimondii
Gorai.013G264600 Gossypium raimondii
GSVIVG01016588001 Vitis vinifera
GSVIVG01025009001 Vitis vinifera
GSVIVG01030785001 Vitis vinifera
HanXRQChr06g0175781 Helianthus annuus
HanXRQChr08g0227521 Helianthus annuus
HanXRQChr14g0444691 Helianthus annuus
HanXRQChr14g0454021 Helianthus annuus
HanXRQChr14g0458301 Helianthus annuus
HanXRQChr15g0483181 Helianthus annuus
Haze_13611 Corylus avellana
Haze_14262 Corylus avellana
Haze_17037 Corylus avellana
Haze_24048 Corylus avellana
Haze_26241 Corylus avellana
Hma1.2p1_0035F.1_g022155 Hydrangea macrophylla
Hma1.2p1_0158F.1_g070180 Hydrangea macrophylla
Hma1.2p1_0624F.1_g191370 Hydrangea macrophylla
Hma1.2p1_0727F.1_g209190 Hydrangea macrophylla
Hma1.2p1_1065F.1_g253660 Hydrangea macrophylla
Hma1.2p1_2678F.1_g326750 Hydrangea macrophylla
HPP92_014314 Vanilla planifolia
HPP92_018998 Vanilla planifolia
HPP92_024824 Vanilla planifolia
Hund04989 Selenicereus undatus
Hund18928 Selenicereus undatus
Hund25097 Selenicereus undatus
Lalb_Chr04g0251381 Lupinus albus
Lalb_Chr10g0091751 Lupinus albus
Lalb_Chr14g0375041 Lupinus albus
Lalb_Chr15g0084911 Lupinus albus
Lalb_Chr18g0053451 Lupinus albus
Lalb_Chr24g0394231 Lupinus albus
Lj1A157T43 Lonicera japonica
Lj1C934G7 Lonicera japonica
Lj1g0017338 Lotus japonicus
Lj2A1057G41 Lonicera japonica
Lj3A970T56 Lonicera japonica
Lj3g0013964 Lotus japonicus
Lj3g0023044 Lotus japonicus
Lj6g0020228 Lotus japonicus
Lsat_1_v5_gn_2_117740 Lactuca sativa
Lsat_1_v5_gn_2_69001 Lactuca sativa
Lsat_1_v5_gn_3_64740 Lactuca sativa
Lsat_1_v5_gn_5_155340 Lactuca sativa
Lsat_1_v5_gn_6_31400 Lactuca sativa
Lsat_1_v5_gn_7_65860 Lactuca sativa
Lsat_1_v5_gn_8_77900 Lactuca sativa
Manes.01G118500 Manihot esculenta
Manes.02G076900 Manihot esculenta
Manes.04G032200 Manihot esculenta
Manes.07G113400 Manihot esculenta
Manes.11G133200 Manihot esculenta
Mapoly0015s0045 Marchantia polymorpha
MBI05_g10363_MAGBIO Magnolia biondii
MBI14_g18542_MAGBIO Magnolia biondii
MD03G1097200 Malus domestica
MD07G1194100 Malus domestica
MD09G1263100 Malus domestica
MD11G1143800 Malus domestica
MD17G1258100 Malus domestica
MD17G1258200 Malus domestica
Medtr3g065490 Medicago truncatula
Medtr3g118240 Medicago truncatula
Medtr4g063557 Medicago truncatula
Medtr5g041970 Medicago truncatula
Medtr5g041980 Medicago truncatula
Medtr5g084370 Medicago truncatula
Medtr5g084380 Medicago truncatula
Medtr7g024090 Medicago truncatula
Medtr7g024150 Medicago truncatula
MELO3C013685.2 Cucumis melo
MELO3C020222.2 Cucumis melo
MELO3C020710.2 Cucumis melo
Migut.H02261 Erythranthe guttata
Migut.J00347 Erythranthe guttata
Migut.N02668 Erythranthe guttata
MSTRG.12642 Avicennia marina
MSTRG.17839 Avicennia marina
MSTRG.2616 Avicennia marina
Nitab4.5_0000349g0140 Nicotiana tabacum
Nitab4.5_0000527g0120 Nicotiana tabacum
Nitab4.5_0000574g0070 Nicotiana tabacum
Nitab4.5_0000597g0040 Nicotiana tabacum
Nitab4.5_0000610g0070 Nicotiana tabacum
Nitab4.5_0000610g0190 Nicotiana tabacum
Nitab4.5_0003673g0020 Nicotiana tabacum
Nitab4.5_0003782g0070 Nicotiana tabacum
Nitab4.5_0005065g0040 Nicotiana tabacum
Nn2g10421 Nelumbo nucifera
Nn2g12935 Nelumbo nucifera
Nn4g24274 Nelumbo nucifera
Oeu002129.1 Olea europaea
Oeu012254.3 Olea europaea
Oeu031140.2 Olea europaea
Oeu032324.4 Olea europaea
Oeu041028.3 Olea europaea
Oeu054162.3 Olea europaea
Os03g0278300 Oryza sativa ssp. japonica
Os06g0256200 Oryza sativa ssp. japonica
Os07g0237100 Oryza sativa ssp. japonica
Os08g0427900 Oryza sativa ssp. japonica
Os11g0100200 Oryza sativa ssp. japonica
Os12g0100100 Oryza sativa ssp. japonica
Peaxi162Scf00134g01911 Petunia axillaris
Peaxi162Scf00305g00056 Petunia axillaris
Peaxi162Scf00406g00131 Petunia axillaris
Peaxi162Scf00407g00521 Petunia axillaris
Peaxi162Scf00658g00631 Petunia axillaris
PGR042G1980 Punica granatum
PGR102G3154 Punica granatum
PGR142G4421 Punica granatum
PGSC0003DMG400023623 Solanum tuberosum
PGSC0003DMG400035146 Solanum tuberosum
PGSC0003DMG401019209 Solanum tuberosum
PGSC0003DMG402015684 Solanum tuberosum
PGSC0003DMG402019209 Solanum tuberosum
Phvul.001G230200 Phaseolus vulgaris
Phvul.008G013600 Phaseolus vulgaris
Phvul.011G066000 Phaseolus vulgaris
Phvul.L003743 Phaseolus vulgaris
Potri.001G236900 Populus trichocarpa
Potri.004G087000 Populus trichocarpa
Potri.008G052601 Populus trichocarpa
Potri.010G208000 Populus trichocarpa
Potri.016G093944 Populus trichocarpa
Potri.017G129900 Populus trichocarpa
Pp3c16_21370 Physcomitrium patens
Pp3c25_13340 Physcomitrium patens
Pp3c5_27300 Physcomitrium patens
Pp3c6_2570 Physcomitrium patens
Prupe.2G231500 Prunus persica
Prupe.3G160800 Prunus persica
Prupe.6G081700 Prunus persica
Psat3g180880 Pisum sativum
Psat5g121800 Pisum sativum
Psat7g218080 Pisum sativum
PSO017G5103 Papaver somniferum
PSO017G6278 Papaver somniferum
PSO339G0026 Papaver somniferum
PSO339G4215 Papaver somniferum
PSO384G1796 Papaver somniferum
PSO478G0638 Papaver somniferum
PSO648G0123 Papaver somniferum
QL01p032964 Quercus lobata
QL02p058151 Quercus lobata
QL03p014985 Quercus lobata
QL08p059030 Quercus lobata
QL93p0100_0542 Quercus lobata
RcHm_v2.0_Chr1g0366271 Rosa chinensis
RcHm_v2.0_Chr3g0492141 Rosa chinensis
RcHm_v2.0_Chr3g0493301 Rosa chinensis
RcHm_v2.0_Chr3g0493311 Rosa chinensis
RcHm_v2.0_Chr5g0063611 Rosa chinensis
Rhsim01G0225400 Rhododendron simsii
Rhsim03G0123600 Rhododendron simsii
Rhsim05G0189500 Rhododendron simsii
Rhsim10G0177300 Rhododendron simsii
RhsimUnG0116000 Rhododendron simsii
Sabra04G0057800 Salix brachista
Sabra08G0146000 Salix brachista
Sabra09G0019600 Salix brachista
Sabra10G0160800 Salix brachista
Sabra16G0101400 Salix brachista
Sabra16G0142800 Salix brachista
Sabra16G0180700 Salix brachista
Sabra17G0108100 Salix brachista
Sabra19G0016800 Salix brachista
SalBow2G1248 Salvia bowleyana
SalBow3G1877 Salvia bowleyana
SalBow3G2929 Salvia bowleyana
Sc10g0004770 Simmondsia chinensis
Sc12g0001620 Simmondsia chinensis
Sc20g0004800 Simmondsia chinensis
Sed0001667 Sechium edule
Sed0002489 Sechium edule
Sed0006931 Sechium edule
Sed0008125 Sechium edule
SEGI_11542 Sequoiadendron giganteum
SEGI_22074 Sequoiadendron giganteum
SEGI_38518 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30956 Striga asiatica
SGA_v2.0_scaffold126G33807 Striga asiatica
SGA_v2.0_scaffold2G00937 Striga asiatica
SGA_v2.0_scaffold80G25729 Striga asiatica
SHI30106 Sapria himalayana
SMO364G0204 Selaginella moellendorffii
SMO367G0466 Selaginella moellendorffii
SMO367G1309 Selaginella moellendorffii
Solyc04g014460.4 Solanum lycopersicum
Solyc10g086400.2 Solanum lycopersicum
Solyc11g011130.3 Solanum lycopersicum
Solyc11g073280.2 Solanum lycopersicum
Sopen04g006580 Solanum pennellii
Sopen10g035780 Solanum pennellii
Sopen11g005890 Solanum pennellii
Sopen11g030910 Solanum pennellii
Sp5g21330 Schrenkiella parvula
Sp6g21630 Schrenkiella parvula
Sp6g39980 Schrenkiella parvula
Sp7g04340 Schrenkiella parvula
SpUn0215_0010 Schrenkiella parvula
TAR369G0298 Trochodendron aralioides
TAR371G0007 Trochodendron aralioides
TAR371G1013 Trochodendron aralioides
TAR629G1868 Trochodendron aralioides
TAR633G2207 Trochodendron aralioides
TAR636G0228 Trochodendron aralioides
THA.LOC104816286 Tarenaya hassleriana
THA.LOC104822306 Tarenaya hassleriana
THA.LOC104823255 Tarenaya hassleriana
THA.LOC104823841 Tarenaya hassleriana
THA.LOC104827008 Tarenaya hassleriana
Thecc.05G042800 Theobroma cacao
Thecc.07G194100 Theobroma cacao
Thecc.09G325800 Theobroma cacao
Thecc.10G046800 Theobroma cacao
Thhalv10014286m.g Eutrema salsugineum
Thhalv10014531m.g Eutrema salsugineum
Thhalv10018970m.g Eutrema salsugineum
Thhalv10027861m.g Eutrema salsugineum
TPR.G10213 Trifolium pratense
TPR.G14354 Trifolium pratense
TPR.G15504 Trifolium pratense
TPR.G24922 Trifolium pratense
TPR.G7294 Trifolium pratense
TWI31G0647 Tripterygium wilfordii
TWI38G0221 Tripterygium wilfordii
TWI53G0161 Tripterygium wilfordii
TWI74G1290 Tripterygium wilfordii
TWI75G0996 Tripterygium wilfordii
TWI77G0142 Tripterygium wilfordii
TWI77G0528 Tripterygium wilfordii
unitig_0.g1696 Utricularia gibba
unitig_0.g2161 Utricularia gibba
unitig_6.g29264 Utricularia gibba
unitig_747.g21427 Utricularia gibba
unitig_748.g7032 Utricularia gibba
vmacro07158 Vaccinium macrocarpon
vmacro07695 Vaccinium macrocarpon
vmacro14532 Vaccinium macrocarpon
vmacro20131 Vaccinium macrocarpon
VMungo1080G1188 Vigna mungo
VMungo1383G2214 Vigna mungo
VMungo1383G3034 Vigna mungo
Zm00001eb012600 Zea mays
Zm00001eb094960 Zea mays
Zm00001eb179330 Zea mays
Zm00001eb280750 Zea mays
Zm00001eb303850 Zea mays
Zm00001eb397560 Zea mays

User provided reference genes

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