Gene: SGA_v2.0_scaffold2G00937

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold2G00937
Transcript Identifier SGA_v2.0_scaffold2T00937
Gene Type Coding gene
Location scaffold2 : 1480920-1483307 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001365
#Genes/#Species 458/98
Phylogenetic origin

ID ORTHO05D001291
#Genes/#Species 438/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product RNA-binding (RRM/RBD/RNP motifs) family protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT1G66260

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G66260

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G66260
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G66260
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT1G66260

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.10.1.2.1	RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)