Gene: Pp3c6_2570

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c6_2570
Transcript Identifier Pp3c6_2570V3.4
Gene Type Coding gene
Location Chr06 : 1395929-1398236 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001365
#Genes/#Species 458/98
Phylogenetic origin

ID ORTHO05D001291
#Genes/#Species 438/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

name Pp3c6_2570V3.4
pacid 32977324
alias Phypa_129553
alias Pp1s77_164V6
alias Phpat.006G008900
uniprot A0A2K1KE31

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006406	IBA	GOA Database	mRNA export from nucleus
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT1G66260

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G02530

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G66260
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT5G02530

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR025715	Chromatin target of PRMT1 protein, C-terminal
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain

Mapman id	Description
16.10.1.2.1	RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)