Gene: PGSC0003DMG400035146

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400035146
Transcript Identifier PGSC0003DMT400085575
Gene Type Coding gene
Location ST4.03ch11 : 45406621-45409456 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001365
#Genes/#Species 458/98
Phylogenetic origin

ID ORTHO05D001291
#Genes/#Species 438/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37465102
id PGSC0003DMG400035146.v4.03
uniprot M1D9T2

Descriptions

Short descriptions
Ortholog descriptions

Description ALY protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006406	IBA	GOA Database	mRNA export from nucleus

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G02530

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT5G59950
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT5G02530

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.10.1.2.1	RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)