Gene: Pp3c16_21370

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_21370
  • Transcript Identifier Pp3c16_21370V3.2
  • Gene Type Coding gene
  • Location Chr16 : 13217392-13219368 : negative

Gene Family Information

  • ID HOM05D001365
  • #Genes/#Species 458/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_21370V3.2
  • pacid 32986479
  • alias Phpat.016G086500
  • alias Phypa_112481
  • alias Pp1s4_67V6
  • uniprot A0A2K1J9J0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
IBA
GOA DatabasemRNA export from nucleus
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G66260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G02530

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G66260
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G02530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 Chromatin target of PRMT1 protein, C-terminal
IPR000504 RNA recognition motif domain
Mapman id Description
16.10.1.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)