Gene: Cre10.g462250

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre10.g462250
  • Transcript Identifier Cre10.g462250.t1.2
  • Gene Type Coding gene
  • Location chromosome_10 : 5941530-5945043 : negative

Gene Family Information

  • ID HOM05D001365
  • #Genes/#Species 458/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre10.g462250.v5.5
  • pacid 30789912
  • alias g11331.t1
  • geneName REF1
  • uniprot A8I1B8

Descriptions

  • Description RNA Export Factor
  • Description Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A) mRNA from the nucleus; member of the REF (RNA and export factor binding proteins) family; homologue of YRA1 and YRA2 yeast proteins. Contains one RNA recognition motif (RRM).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G66260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G02530
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G02530

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G66260
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G66260
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G02530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.10.1.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)