Gene: BcaB01g06171
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaB01g06171
- Transcript Identifier BcaB01g06171
- Gene Type Coding gene
- Location ChrB01 : 71298685-71303961 : negative
Gene Family Information
- ID HOM05D001365
- #Genes/#Species 458/98
- Phylogenetic origin
- ID ORTHO05D001291
- #Genes/#Species 438/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G02530 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G02530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT5G02530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR025715 | Chromatin target of PRMT1 protein, C-terminal |
| IPR000504 | RNA recognition motif domain |
| IPR018943 | Oligosaccaryltransferase |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036330 | Oligosaccharyltransferase subunit ost4p superfamily |
| Mapman id | Description |
|---|---|
| 16.10.1.2.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4) |
| 18.1.1.5.4 | Protein modification.glycosylation.N-linked glycosylation.oligosaccharyl transferase (OST) complex.component OST4 |