Gene: PGSC0003DMG402019209

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG402019209
Transcript Identifier PGSC0003DMT400049444
Gene Type Coding gene
Location ST4.03ch10 : 51372650-51377778 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001365
#Genes/#Species 458/98
Phylogenetic origin

ID ORTHO05D001291
#Genes/#Species 438/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pacid 37477129
id PGSC0003DMG402019209.v4.03
uniprot M1BNR7

Descriptions

Short descriptions
Ortholog descriptions

Description ALY protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006406	IBA	GOA Database	mRNA export from nucleus

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G02530

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT5G02530

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily
IPR025715	Chromatin target of PRMT1 protein, C-terminal

Mapman id	Description
16.10.1.2.1	RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.mRNA export adaptor activities.mRNA-binding adaptor (ALY/Tho4)