Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33000 Brassica napus
A04p11430 Brassica napus
A06p12130 Brassica napus
A07p19720 Brassica napus
A07p27020 Brassica napus
A09p60980 Brassica napus
A10p22950 Brassica napus
A10p22960 Brassica napus
Aa31LG11G13520 Aethionema arabicum
Aa31LG4G1320 Aethionema arabicum
Aa31LG5G13040 Aethionema arabicum
Aa31LG7G730 Aethionema arabicum
Aa31LG9G17060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2536 Anthoceros agrestis
Actinidia13664 Actinidia chinensis
Actinidia14882 Actinidia chinensis
Actinidia16645 Actinidia chinensis
Actinidia17631 Actinidia chinensis
Actinidia18268 Actinidia chinensis
Actinidia25490 Actinidia chinensis
Actinidia25491 Actinidia chinensis
Actinidia26299 Actinidia chinensis
Actinidia38381 Actinidia chinensis
Actinidia38382 Actinidia chinensis
Ah.07g204070 Amaranthus hybridus
Ah.16g101860 Amaranthus hybridus
AL1G28320 Arabidopsis lyrata
AL2G40340 Arabidopsis lyrata
AL3G11900 Arabidopsis lyrata
AL6G26970 Arabidopsis lyrata
AL7G52100 Arabidopsis lyrata
Aqoxy3G00319 Aquilegia oxysepala
Aqoxy7G03274 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2JXR5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2R0TWK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AH6D3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CQ5GAV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7XJR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSQ86Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TCIE48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD47CB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WI1D2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4SPH8 Arachis hypogaea
AT1G16190 Arabidopsis thaliana
AT1G79650 Arabidopsis thaliana
AT3G02540 Arabidopsis thaliana
AT5G16090 Arabidopsis thaliana
AT5G38470 Arabidopsis thaliana
ATR0171G001 Amborella trichopoda
ATR0580G066 Amborella trichopoda
Atru.chr1.2822 Acer truncatum
AUR62002627 Chenopodium quinoa
AUR62002881 Chenopodium quinoa
AUR62006926 Chenopodium quinoa
AUR62008982 Chenopodium quinoa
AUR62023321 Chenopodium quinoa
AUR62030041 Chenopodium quinoa
AUR62032070 Chenopodium quinoa
AUR62035244 Chenopodium quinoa
BcaB02g06600 Brassica carinata
BcaB02g07230 Brassica carinata
BcaB02g08007 Brassica carinata
BcaB03g14501 Brassica carinata
BcaB06g27225 Brassica carinata
BcaB08g36886 Brassica carinata
BcaC01g04440 Brassica carinata
BcaC02g09649 Brassica carinata
BcaC04g18908 Brassica carinata
BcaC05g25595 Brassica carinata
BcaC08g44380 Brassica carinata
BcaC09g47707 Brassica carinata
BcaNung04174 Brassica carinata
BolC3t16280H Brassica oleracea
BolC4t26092H Brassica oleracea
BolC5t30164H Brassica oleracea
BolC6t37023H Brassica oleracea
BolC6t38136H Brassica oleracea
BolC8t52004H Brassica oleracea
BolC9t58933H Brassica oleracea
BolC9t58936H Brassica oleracea
BolC9t58937H Brassica oleracea
BraA03t12468Z Brassica rapa
BraA04t16807Z Brassica rapa
BraA06t24382Z Brassica rapa
BraA07t29671Z Brassica rapa
BraA07t30346Z Brassica rapa
BraA09t41471Z Brassica rapa
BraA10t44363Z Brassica rapa
BraA10t44364Z Brassica rapa
BraA10t44365Z Brassica rapa
C03p40140 Brassica napus
C04p45120 Brassica napus
C05p14370 Brassica napus
C06p18140 Brassica napus
C06p29750 Brassica napus
C08p44590 Brassica napus
C09p60900 Brassica napus
C09p60920 Brassica napus
C09p60930 Brassica napus
CAN.G1008.16 Capsicum annuum
CAN.G25.6 Capsicum annuum
CAN.G625.7 Capsicum annuum
CAN.G774.60 Capsicum annuum
CAN.G953.9 Capsicum annuum
CANSAT01G2966 Cannabis sativa
CANSAT64G1121 Cannabis sativa
CANSAT64G2888 Cannabis sativa
CARHR016670 Cardamine hirsuta
CARHR073380 Cardamine hirsuta
CARHR076540 Cardamine hirsuta
CARHR291840 Cardamine hirsuta
Carub.0001s1595 Capsella rubella
Carub.0002s2653 Capsella rubella
Carub.0003s0165 Capsella rubella
Carub.0007s3743 Capsella rubella
Ca_01004_v3 Cicer arietinum L.
Ca_04067_v3 Cicer arietinum L.
Ca_11180_v3 Cicer arietinum L.
CBR_g20362 Chara braunii
Cc00_g12400 Coffea canephora
Cc04_g05410 Coffea canephora
Cc07_g08860 Coffea canephora
CDE02G3609 Ceratophyllum demersum
CDE04G0056 Ceratophyllum demersum
CDE04G3211 Ceratophyllum demersum
CDE05G0033 Ceratophyllum demersum
CDE05G0066 Ceratophyllum demersum
Cfa004170 Carpinus fangiana
Cfa007930 Carpinus fangiana
Cfa018605 Carpinus fangiana
Ciclev10011886m.g Citrus clementina
Ciclev10025868m.g Citrus clementina
Ciclev10031777m.g Citrus clementina
CiPaw.01G051600 Carya illinoinensis
CiPaw.02G024500 Carya illinoinensis
CiPaw.03G060800 Carya illinoinensis
CiPaw.04G041200 Carya illinoinensis
CiPaw.04G041600 Carya illinoinensis
ClCG05G022800 Citrullus lanatus
ClCG10G012840 Citrullus lanatus
ClCG10G014660 Citrullus lanatus
COL.COLO4_05462 Corchorus olitorius
COL.COLO4_07912 Corchorus olitorius
COL.COLO4_30171 Corchorus olitorius
Cpa.g.sc1.181 Carica papaya
Cpa.g.sc68.39 Carica papaya
Cre08.g366400 Chlamydomonas reinhardtii
CsaV3_3G032680 Cucumis sativus L.
CsaV3_3G041900 Cucumis sativus L.
CsaV3_5G034230 Cucumis sativus L.
CSS0012157 Camellia sinensis var. sinensis
CSS0013470 Camellia sinensis var. sinensis
CSS0017705 Camellia sinensis var. sinensis
CSS0022019 Camellia sinensis var. sinensis
CSS0032032 Camellia sinensis var. sinensis
CSS0032682 Camellia sinensis var. sinensis
CSS0033479 Camellia sinensis var. sinensis
CSS0034360 Camellia sinensis var. sinensis
CSS0036061 Camellia sinensis var. sinensis
CSS0037316 Camellia sinensis var. sinensis
CSS0039379 Camellia sinensis var. sinensis
CSS0044974 Camellia sinensis var. sinensis
CSS0048000 Camellia sinensis var. sinensis
CSS0050339 Camellia sinensis var. sinensis
DCAR_016320 Daucus carota
DCAR_017203 Daucus carota
DCAR_023665 Daucus carota
DCAR_025613 Daucus carota
DCAR_026729 Daucus carota
Dinv04478 Davidia involucrata
Dinv21100 Davidia involucrata
Dinv21440 Davidia involucrata
Dinv23262 Davidia involucrata
Dinv33937 Davidia involucrata
Dinv34833 Davidia involucrata
Duzib160G0846 Durio zibethinus
Duzib192G0873 Durio zibethinus
Duzib235G1178 Durio zibethinus
Duzib248G1339 Durio zibethinus
Duzib251G0773 Durio zibethinus
Duzib268G1583 Durio zibethinus
ECA232G1891 Erigeron canadensis
ECA232G3592 Erigeron canadensis
ECA234G1519 Erigeron canadensis
ECA246G2146 Erigeron canadensis
EL10Ac2g04585 Beta vulgaris
EL10Ac3g06320 Beta vulgaris
EL10Ac6g14429 Beta vulgaris
Eucgr.B03019 Eucalyptus grandis
Eucgr.J03137 Eucalyptus grandis
FAN02G2422 Fragaria x ananassa
FAN02G2709 Fragaria x ananassa
FAN05G2022 Fragaria x ananassa
FAN05G4802 Fragaria x ananassa
FAN07G0481 Fragaria x ananassa
FAN09G0034 Fragaria x ananassa
FAN09G0890 Fragaria x ananassa
FAN09G2681 Fragaria x ananassa
FAN12G0856 Fragaria x ananassa
FAN12G1493 Fragaria x ananassa
FAN14G3228 Fragaria x ananassa
FAN14G4170 Fragaria x ananassa
FAN14G5168 Fragaria x ananassa
FAN22G2053 Fragaria x ananassa
FvH4_4g27550 Fragaria vesca
FvH4_6g28060 Fragaria vesca
FvH4_6g45190 Fragaria vesca
Glyma.01G081500 Glycine max
Glyma.07G002800 Glycine max
Glyma.08G223800 Glycine max
Glyma.08G262900 Glycine max
Glyma.10G275100 Glycine max
Glyma.13G371600 Glycine max
Glyma.15G002002 Glycine max
Glyma.18G297400 Glycine max
Glyma.20G114700 Glycine max
Gohir.A06G141900 Gossypium hirsutum
Gohir.A09G076080 Gossypium hirsutum
Gohir.A10G049100 Gossypium hirsutum
Gohir.A13G054400 Gossypium hirsutum
Gohir.A13G054500 Gossypium hirsutum
Gohir.A13G054700 Gossypium hirsutum
Gohir.A13G054800 Gossypium hirsutum
Gohir.D06G145800 Gossypium hirsutum
Gohir.D09G075900 Gossypium hirsutum
Gohir.D10G049700 Gossypium hirsutum
Gohir.D13G067200 Gossypium hirsutum
Gohir.D13G067300 Gossypium hirsutum
Gohir.D13G067400 Gossypium hirsutum
Gohir.D13G067500 Gossypium hirsutum
Gorai.006G091100 Gossypium raimondii
Gorai.010G170000 Gossypium raimondii
Gorai.011G053200 Gossypium raimondii
Gorai.013G076500 Gossypium raimondii
Gorai.013G076600 Gossypium raimondii
Gorai.013G076800 Gossypium raimondii
Gorai.013G076900 Gossypium raimondii
GSVIVG01011907001 Vitis vinifera
GSVIVG01016076001 Vitis vinifera
GSVIVG01031048001 Vitis vinifera
HanXRQChr09g0274271 Helianthus annuus
HanXRQChr15g0477171 Helianthus annuus
HanXRQChr16g0499511 Helianthus annuus
HanXRQChr17g0552171 Helianthus annuus
HanXRQChr17g0567641 Helianthus annuus
Haze_14142 Corylus avellana
Haze_15240 Corylus avellana
Haze_17469 Corylus avellana
Hma1.2p1_0061F.1_g034090 Hydrangea macrophylla
Hma1.2p1_0136F.1_g062210 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177380 Hydrangea macrophylla
Hma1.2p1_1774F.1_g301830 Hydrangea macrophylla
HPP92_013217 Vanilla planifolia
HPP92_013218 Vanilla planifolia
HPP92_013260 Vanilla planifolia
HPP92_013261 Vanilla planifolia
HPP92_018543 Vanilla planifolia
Hund13725 Selenicereus undatus
Hund16138 Selenicereus undatus
Hund22398 Selenicereus undatus
Hund25077 Selenicereus undatus
Lalb_Chr02g0146051 Lupinus albus
Lalb_Chr04g0257401 Lupinus albus
Lalb_Chr06g0166151 Lupinus albus
Lalb_Chr10g0091191 Lupinus albus
Lalb_Chr10g0099971 Lupinus albus
Lalb_Chr17g0342101 Lupinus albus
Lalb_Chr21g0308981 Lupinus albus
Lalb_Chr24g0392791 Lupinus albus
Lj1g0010181 Lotus japonicus
Lj2C443G8 Lonicera japonica
Lj2g0009720 Lotus japonicus
Lj3A1017G47 Lonicera japonica
Lj3g0024342 Lotus japonicus
Lj5C82T13 Lonicera japonica
Lj5g0008360 Lotus japonicus
Lj6A760T49 Lonicera japonica
Lsat_1_v5_gn_3_59620 Lactuca sativa
Lsat_1_v5_gn_4_18380 Lactuca sativa
Lsat_1_v5_gn_4_84860 Lactuca sativa
Lsat_1_v5_gn_8_39020 Lactuca sativa
Manes.01G109600 Manihot esculenta
Manes.02G067800 Manihot esculenta
Manes.04G098700 Manihot esculenta
Manes.06G069400 Manihot esculenta
Manes.11G070800 Manihot esculenta
Manes.14G101300 Manihot esculenta
Mapoly0002s0249 Marchantia polymorpha
MBI07_g18991_MAGBIO Magnolia biondii
MBI13_g10047_MAGBIO Magnolia biondii
MBI13_g43572_MAGBIO Magnolia biondii
MBI18_g04362_MAGBIO Magnolia biondii
MCO15G320 Micromonas commoda
MD09G1087400 Malus domestica
MD09G1229800 Malus domestica
MD13G1043000 Malus domestica
MD16G1043900 Malus domestica
MD17G1075700 Malus domestica
MD17G1076200 Malus domestica
MD17G1228500 Malus domestica
Medtr1g111090 Medicago truncatula
Medtr2g105410 Medicago truncatula
Medtr7g006500 Medicago truncatula
Medtr7g037380 Medicago truncatula
Medtr7g407040 Medicago truncatula
MELO3C009909.2 Cucumis melo
MELO3C012238.2 Cucumis melo
MELO3C024883.2 Cucumis melo
Migut.D01150 Erythranthe guttata
Migut.E00329 Erythranthe guttata
Migut.H00209 Erythranthe guttata
Migut.I00635 Erythranthe guttata
Migut.L00311 Erythranthe guttata
MSTRG.13520 Avicennia marina
MSTRG.2246 Avicennia marina
MSTRG.22836 Avicennia marina
MSTRG.830 Avicennia marina
MSTRG.9388 Avicennia marina
Nitab4.5_0000126g0020 Nicotiana tabacum
Nitab4.5_0000280g0260 Nicotiana tabacum
Nitab4.5_0001569g0120 Nicotiana tabacum
Nitab4.5_0002540g0100 Nicotiana tabacum
Nitab4.5_0003189g0010 Nicotiana tabacum
Nitab4.5_0004194g0050 Nicotiana tabacum
Nitab4.5_0004781g0010 Nicotiana tabacum
Nitab4.5_0005199g0040 Nicotiana tabacum
Nitab4.5_0005437g0030 Nicotiana tabacum
Nitab4.5_0005737g0010 Nicotiana tabacum
Nitab4.5_0005961g0010 Nicotiana tabacum
Nitab4.5_0007111g0020 Nicotiana tabacum
Nn2g12487 Nelumbo nucifera
Nn3g17285 Nelumbo nucifera
Nn3g17814 Nelumbo nucifera
Nn4g23813 Nelumbo nucifera
Nn8g40143 Nelumbo nucifera
Oeu003108.1 Olea europaea
Oeu008048.1 Olea europaea
Oeu030778.1 Olea europaea
Oeu033720.1 Olea europaea
Oeu033731.3 Olea europaea
Oeu050370.2 Olea europaea
Oeu051547.1 Olea europaea
Oeu053671.1 Olea europaea
Os02g0179300 Oryza sativa ssp. japonica
Os02g0465000 Oryza sativa ssp. japonica
Os06g0264300 Oryza sativa ssp. japonica
Os08g0430200 Oryza sativa ssp. japonica
Os09g0407200 Oryza sativa ssp. japonica
Peaxi162Scf00086g00916 Petunia axillaris
Peaxi162Scf00195g00121 Petunia axillaris
Peaxi162Scf00314g00930 Petunia axillaris
Peaxi162Scf00501g00129 Petunia axillaris
Peaxi162Scf00814g00225 Petunia axillaris
PGR031G1440 Punica granatum
PGR102G1487 Punica granatum
PGR119G0514 Punica granatum
PGSC0003DMG400012654 Solanum tuberosum
PGSC0003DMG400024190 Solanum tuberosum
PGSC0003DMG401014218 Solanum tuberosum
Phvul.005G184000 Phaseolus vulgaris
Phvul.007G026400 Phaseolus vulgaris
Phvul.007G026600 Phaseolus vulgaris
Phvul.010G163300 Phaseolus vulgaris
Potri.001G038000 Populus trichocarpa
Potri.003G186600 Populus trichocarpa
Potri.004G100700 Populus trichocarpa
Potri.008G119700 Populus trichocarpa
Potri.010G126200 Populus trichocarpa
Potri.017G114000 Populus trichocarpa
Pp3c10_8490 Physcomitrium patens
Pp3c18_16750 Physcomitrium patens
Pp3c18_16820 Physcomitrium patens
Pp3c21_190 Physcomitrium patens
Pp3c21_210 Physcomitrium patens
PRCOL_00001791 Prasinoderma coloniale
Prupe.1G309400 Prunus persica
Prupe.1G309600 Prunus persica
Prupe.3G105900 Prunus persica
Prupe.3G238000 Prunus persica
Psat0s2789g0040 Pisum sativum
Psat3g205600 Pisum sativum
Psat5g308200 Pisum sativum
Psat6g228880 Pisum sativum
PSO017G0864 Papaver somniferum
PSO063G1100 Papaver somniferum
PSO063G3886 Papaver somniferum
PSO478G1116 Papaver somniferum
PSO509G0009 Papaver somniferum
PSO782G3663 Papaver somniferum
PSO782G5484 Papaver somniferum
QL02p051988 Quercus lobata
QL02p052021 Quercus lobata
QL05p081609 Quercus lobata
RcHm_v2.0_Chr1g0327471 Rosa chinensis
RcHm_v2.0_Chr2g0131831 Rosa chinensis
RcHm_v2.0_Chr2g0162901 Rosa chinensis
RcHm_v2.0_Chr4g0435391 Rosa chinensis
Rhsim08G0201400 Rhododendron simsii
Rhsim08G0201700 Rhododendron simsii
Rhsim08G0201800 Rhododendron simsii
Rhsim08G0202000 Rhododendron simsii
Rhsim08G0202200 Rhododendron simsii
Rhsim09G0109100 Rhododendron simsii
Rhsim10G0023600 Rhododendron simsii
Rhsim12G0083000 Rhododendron simsii
Sabra01G0026600 Salix brachista
Sabra03G0136700 Salix brachista
Sabra04G0079300 Salix brachista
Sabra10G0095900 Salix brachista
SalBow8G3482 Salvia bowleyana
SalBow8G4417 Salvia bowleyana
Sc10g0001230 Simmondsia chinensis
Sc10g0006480 Simmondsia chinensis
Sc11g0008270 Simmondsia chinensis
Sc14g0007520 Simmondsia chinensis
Sed0001035 Sechium edule
Sed0005465 Sechium edule
Sed0008781 Sechium edule
Sed0016702 Sechium edule
Sed0022782 Sechium edule
Sed0024821 Sechium edule
SEGI_09049 Sequoiadendron giganteum
SEGI_09322 Sequoiadendron giganteum
SEGI_18077 Sequoiadendron giganteum
SEGI_30054 Sequoiadendron giganteum
SEGI_35711 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06852 Striga asiatica
SGA_v2.0_scaffold170G38752 Striga asiatica
SGA_v2.0_scaffold2G00991 Striga asiatica
SGA_v2.0_scaffold2G01106 Striga asiatica
SGA_v2.0_scaffold2G01132 Striga asiatica
SGA_v2.0_scaffold5G02834 Striga asiatica
SHI11333 Sapria himalayana
SMO353G0381 Selaginella moellendorffii
SMO364G0855 Selaginella moellendorffii
Solyc02g063130.4 Solanum lycopersicum
Solyc02g063133.1 Solanum lycopersicum
Solyc02g085840.2 Solanum lycopersicum
Solyc03g117780.2 Solanum lycopersicum
Solyc04g007120.4 Solanum lycopersicum
Sopen02g014200 Solanum pennellii
Sopen02g030530 Solanum pennellii
Sopen03g036690 Solanum pennellii
Sopen04g002210 Solanum pennellii
Sp1g14430 Schrenkiella parvula
Sp3g01570 Schrenkiella parvula
Sp5g34720 Schrenkiella parvula
Sp7g03580 Schrenkiella parvula
TAR371G1262 Trochodendron aralioides
TAR622G0705 Trochodendron aralioides
TAR625G1188 Trochodendron aralioides
TAR629G2621 Trochodendron aralioides
THA.LOC104803002 Tarenaya hassleriana
THA.LOC104808161 Tarenaya hassleriana
THA.LOC104820952 Tarenaya hassleriana
THA.LOC104822643 Tarenaya hassleriana
THA.LOC104823864 Tarenaya hassleriana
Thecc.02G356500 Theobroma cacao
Thecc.04G135400 Theobroma cacao
Thecc.06G133500 Theobroma cacao
Thhalv10007982m.g Eutrema salsugineum
Thhalv10016009m.g Eutrema salsugineum
Thhalv10018655m.g Eutrema salsugineum
Thhalv10020817m.g Eutrema salsugineum
Thhalv10027790m.g Eutrema salsugineum
TPR.G11095 Trifolium pratense
TPR.G26274 Trifolium pratense
TPR.G9716 Trifolium pratense
TWI53G1625 Tripterygium wilfordii
TWI74G1005 Tripterygium wilfordii
TWI74G1388 Tripterygium wilfordii
TWI75G1180 Tripterygium wilfordii
TWI77G0519 Tripterygium wilfordii
unitig_22.g6872 Utricularia gibba
unitig_52.g17031 Utricularia gibba
unitig_747.g21197 Utricularia gibba
unitig_747.g21198 Utricularia gibba
unitig_8.g3444 Utricularia gibba
unitig_8.g3445 Utricularia gibba
vmacro01376 Vaccinium macrocarpon
vmacro05561 Vaccinium macrocarpon
vmacro05562 Vaccinium macrocarpon
vmacro10552 Vaccinium macrocarpon
vmacro19082 Vaccinium macrocarpon
VMungo0331G0148 Vigna mungo
VMungo0578G0001 Vigna mungo
VMungo0720G2089 Vigna mungo
VMungo1080G1097 Vigna mungo
VMungo1309G2748 Vigna mungo
Zm00001eb099280 Zea mays
Zm00001eb206650 Zea mays
Zm00001eb280580 Zea mays
Zm00001eb312260 Zea mays
Zm00001eb379990 Zea mays

User provided reference genes

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