Gene: SGA_v2.0_scaffold5G02834

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold5G02834
Transcript Identifier SGA_v2.0_scaffold5T02834
Gene Type Coding gene
Location scaffold5 : 1976349-1980300 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001266
#Genes/#Species 494/100
Phylogenetic origin

ID ORTHO05D001105
#Genes/#Species 484/99
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Rad23 UV excision repair protein family

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006289	IEA	InterPro	nucleotide-excision repair
GO:0043161	IEA	InterPro	proteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003684	IEA	InterPro	damaged DNA binding
GO:0070628	ISO	PLAZA Integrative Orthology	proteasome binding	AT1G16190
GO:0043130	ISO	PLAZA Integrative Orthology	ubiquitin binding	AT1G16190
GO:0031593	ISO	PLAZA Integrative Orthology	polyubiquitin modification-dependent protein binding	AT1G16190

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G16190
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G16190

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000626	Ubiquitin-like domain
IPR036353	XPC-binding domain superfamily
IPR029071	Ubiquitin-like domain superfamily
IPR015940	Ubiquitin-associated domain
IPR009060	UBA-like superfamily
IPR004806	UV excision repair protein Rad23
IPR015360	XPC-binding domain
IPR006636	Heat shock chaperonin-binding

Mapman id	Description
19.2.4.2.4.1	Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)