Gene: Os06g0264300

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0264300
  • Transcript Identifier Os06t0264300-01
  • Gene Type Coding gene
  • Location chr06 : 8720750-8726406 : positive

Gene Family Information

  • ID HOM05D001266
  • #Genes/#Species 494/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0264300-01
  • MSU-ID LOC_Os06g15360.3
  • MSU-ID LOC_Os06g15360.4
  • MSU-ID LOC_Os06g15360.1
  • MSU-ID LOC_Os06g15360.2
  • uniprot A3BAG6

Descriptions

  • Description Similar to RAD23, isoform I.
  • Description Similar to DNA repair protein RAD23.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G38470
GO:0043161
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070628
ISO
PLAZA Integrative Orthologyproteasome binding AT5G38470
GO:0005515
IEA
InterProprotein binding
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0031593
IEA
GOA Databasepolyubiquitin modification-dependent protein binding
GO:0043130
IEA
GOA Databaseubiquitin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005829
IEA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015360 XPC-binding domain
IPR036353 XPC-binding domain superfamily
IPR004806 UV excision repair protein Rad23
IPR015940 Ubiquitin-associated domain
IPR029071 Ubiquitin-like domain superfamily
IPR000626 Ubiquitin-like domain
IPR009060 UBA-like superfamily
IPR006636 Heat shock chaperonin-binding
Mapman id Description
19.2.4.2.4.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)