Gene: Cc04_g05410

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g05410
  • Transcript Identifier Cc04_g05410.1
  • Gene Type Coding gene
  • Location chr4 : 4016553-4020610 : negative

Gene Family Information

  • ID HOM05D001266
  • #Genes/#Species 494/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB C6TNE5
  • UniProtKB Q84L33
  • UniProtKB Q84L30
  • UniProtKB I1KG42
  • UniProtKB C6TGK7
  • UniProtKB Q84L32
  • id GSCOCG00022292001

Descriptions

  • Description Putative DNA repair protein RAD23-1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0005515
IEA
InterProprotein binding
GO:0070628
ISO
PLAZA Integrative Orthologyproteasome binding AT1G16190
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT1G16190
GO:0031593
ISO
PLAZA Integrative Orthologypolyubiquitin modification-dependent protein binding AT1G16190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G16190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G16190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036353 XPC-binding domain superfamily
IPR004806 UV excision repair protein Rad23
IPR029071 Ubiquitin-like domain superfamily
IPR006636 Heat shock chaperonin-binding
IPR000626 Ubiquitin-like domain
IPR015940 Ubiquitin-associated domain
IPR009060 UBA-like superfamily
IPR015360 XPC-binding domain
Mapman id Description
19.2.4.2.4.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)