Gene: Nitab4.5_0002540g0100

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002540g0100
  • Transcript Identifier Nitab4.5_0002540g0100.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002540 : 339436-343826 : positive

Gene Family Information

  • ID HOM05D001266
  • #Genes/#Species 494/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002540g0100.1
  • SR1-identifier Nta24g18500.3

Descriptions

  • Description UV excision repair protein Rad23, UBA-like, Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, Ubiquitin supergroup, XPC-binding domain, Ubiquitin domain, Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0005515
IEA
InterProprotein binding
GO:0070628
ISO
PLAZA Integrative Orthologyproteasome binding AT1G16190
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT1G16190
GO:0031593
ISO
PLAZA Integrative Orthologypolyubiquitin modification-dependent protein binding AT1G16190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G16190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G16190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015360 XPC-binding domain
IPR015940 Ubiquitin-associated domain
IPR004806 UV excision repair protein Rad23
IPR000626 Ubiquitin-like domain
IPR009060 UBA-like superfamily
IPR029071 Ubiquitin-like domain superfamily
IPR036353 XPC-binding domain superfamily
Mapman id Description
19.2.4.2.4.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)