Gene: vmacro10552

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro10552
Transcript Identifier vmacro10552-RA
Gene Type Coding gene
Location chr8_Vaccinium_macrocarpon_Stevens_v1 : 11335411-11350185 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001266
#Genes/#Species 494/100
Phylogenetic origin

ID ORTHO05D001105
#Genes/#Species 484/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id vmacro10552_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to RAD23C: Ubiquitin receptor RAD23c (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006289	IEA	InterPro	nucleotide-excision repair
GO:0043161	IEA	InterPro	proteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003684	IEA	InterPro	damaged DNA binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000626	Ubiquitin-like domain
IPR036353	XPC-binding domain superfamily
IPR015940	Ubiquitin-associated domain
IPR004806	UV excision repair protein Rad23
IPR015360	XPC-binding domain
IPR029071	Ubiquitin-like domain superfamily
IPR009060	UBA-like superfamily

Mapman id	Description
19.2.4.2.4.1	Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)