Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0087471 Rosa chinensis HOM05D002640 ORTHO05D003231 6.2e-146 520.8 265 100.0
FvH4_1g02480 Fragaria vesca HOM05D002640 ORTHO05D003231 2.2e-66 256.5 281 56.6
FAN19G1577 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.9e-66 256.1 281 55.9
FAN28G1503 Fragaria x ananassa HOM05D002640 ORTHO05D003231 8.3e-66 254.6 281 56.2
FAN23G2835 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.8e-60 236.9 281 56.2
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 2.1e-56 223.4 269 51.3
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 4.6e-56 222.2 270 51.9
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 1.3e-55 220.7 272 51.1
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 2.3e-55 219.9 272 51.5
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 8.7e-55 218.0 270 51.9
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 1.9e-54 216.9 272 51.1
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 3.3e-54 216.1 270 50.7
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 2.8e-53 213.0 272 50.0
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 4.8e-53 212.2 272 50.0
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 6.2e-53 211.8 270 50.4
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 6.2e-53 211.8 270 50.4
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 6.2e-53 211.8 270 50.4
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 6.2e-53 211.8 272 50.0
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 8.1e-53 211.5 272 50.0
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 8.1e-53 211.5 272 50.0
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 8.1e-53 211.5 270 49.6
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.4e-52 209.9 272 49.6
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 5.3e-52 208.8 270 50.0
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 6.9e-52 208.4 270 48.9
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 6.9e-52 208.4 272 48.9
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 3.4e-51 206.1 270 48.9
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 4.4e-51 205.7 272 49.6
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 5.8e-51 205.3 272 49.3
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 9.9e-51 204.5 269 49.4
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 9.9e-51 204.5 272 48.9
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 1.3e-50 204.1 274 48.5
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 2.9e-50 203.0 272 48.5
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 3.8e-50 202.6 270 48.9
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 6.4e-50 201.8 270 49.3
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 1.1e-49 201.1 272 48.9
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 1.4e-49 200.7 271 47.2
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 1.9e-49 200.3 274 48.5
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 3.2e-49 199.5 272 47.8
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 4.2e-49 199.1 272 47.8
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 4.2e-49 199.1 270 47.0
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 4.2e-49 199.1 272 47.8
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 5.4e-49 198.7 269 47.6
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 5.4e-49 198.7 270 47.8
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 7.1e-49 198.4 272 47.8
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 7.1e-49 198.4 272 46.7
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 9.3e-49 198.0 272 46.3
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 1.2e-48 197.6 272 47.4
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 1.2e-48 197.6 272 48.5
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 1.6e-48 197.2 272 48.9
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 2.1e-48 196.8 272 48.2
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 2.1e-48 196.8 272 47.4
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 2.1e-48 196.8 272 47.8
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 4.6e-48 195.7 279 47.3
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 4.6e-48 195.7 272 48.5
RcHm_v2.0_Chr2g0087911 Rosa chinensis HOM05D002640 ORTHO05D003231 4.6e-48 195.7 269 46.8
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 6.0e-48 195.3 269 46.1
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 7.8e-48 194.9 272 47.1
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.0e-47 194.5 272 48.2
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.0e-47 194.5 272 48.2
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 1.0e-47 194.5 272 48.2
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 1.3e-47 194.1 271 47.2
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 2.3e-47 193.4 272 47.1
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 2.3e-47 193.4 282 47.2
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 3.0e-47 193.0 270 46.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 5.1e-47 192.2 272 46.3
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 5.1e-47 192.2 274 47.8
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 5.1e-47 192.2 297 44.1
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 5.1e-47 192.2 272 45.6
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 6.6e-47 191.8 270 45.6
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 1.1e-46 191.0 272 47.4
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 1.1e-46 191.0 272 47.4
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 1.5e-46 190.7 270 46.7
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.5e-46 190.7 271 46.9
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 1.9e-46 190.3 272 47.1
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 1.9e-46 190.3 301 43.2
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 2.5e-46 189.9 272 46.3
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 2.5e-46 189.9 269 47.6
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 3.3e-46 189.5 272 46.3
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 4.3e-46 189.1 272 46.7
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 4.3e-46 189.1 282 45.7
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 4.3e-46 189.1 267 47.9
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 4.3e-46 189.1 272 47.1
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 5.6e-46 188.7 274 47.4
CDE09G1137 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 7.3e-46 188.3 277 45.1
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 9.6e-46 188.0 272 46.7
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 9.6e-46 188.0 272 46.0
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.3e-45 187.6 269 44.2
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.3e-45 187.6 272 47.1
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.6e-45 187.2 278 44.6
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 2.1e-45 186.8 280 45.7
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.1e-45 186.8 269 45.0
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 2.8e-45 186.4 270 45.2
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 3.6e-45 186.0 274 47.1
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 4.8e-45 185.7 272 45.6
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 6.2e-45 185.3 270 45.9
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 6.2e-45 185.3 280 45.0
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 8.1e-45 184.9 272 44.9
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 8.1e-45 184.9 278 42.1
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 1.1e-44 184.5 270 45.6
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 1.1e-44 184.5 270 44.1
C02p17450 Brassica napus HOM05D002640 ORTHO05D003231 1.1e-44 184.5 270 45.6
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 1.1e-44 184.5 270 45.6
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 1.1e-44 184.5 273 45.8
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 1.1e-44 184.5 274 45.6
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 1.8e-44 183.7 270 45.6
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 1.8e-44 183.7 270 45.6
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 1.8e-44 183.7 272 45.2
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 1.8e-44 183.7 270 44.4
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 2.4e-44 183.3 272 43.8
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 2.4e-44 183.3 272 44.5
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 2.4e-44 183.3 270 44.4
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 2.4e-44 183.3 270 45.2
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 4.0e-44 182.6 272 45.6
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 4.0e-44 182.6 287 43.6
FAN26G2883 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.3e-44 182.2 274 45.6
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 6.9e-44 181.8 270 45.6
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 6.9e-44 181.8 276 44.6
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 9.0e-44 181.4 269 45.4
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 9.0e-44 181.4 269 45.4
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 1.2e-43 181.0 274 45.6
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 1.5e-43 180.6 269 44.6
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 1.5e-43 180.6 269 44.6
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 2.6e-43 179.9 270 45.2
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 3.8e-42 176.0 278 43.5
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.9e-41 173.7 271 42.1
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 9.3e-41 171.4 270 41.5
COL.COLO4_25705 Corchorus olitorius HOM05D002640 ORTHO05D003231 1.2e-40 171.0 267 44.9
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 2.1e-40 170.2 284 44.0
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 2.7e-40 169.9 275 44.0
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 2.7e-40 169.9 272 43.8
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 4.6e-40 169.1 277 40.8
BcaNung05532 Brassica carinata HOM05D002640 ORTHO05D003231 7.9e-40 168.3 258 45.0
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 7.9e-40 168.3 263 43.3
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 3.9e-39 166.0 302 41.7
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.9e-39 166.0 274 40.9
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.9e-39 166.0 274 40.9
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 1.9e-38 163.7 275 41.5
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 1.9e-38 163.7 264 41.7
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 2.5e-38 163.3 278 40.6
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 1.6e-37 160.6 272 40.8
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 8.1e-37 158.3 271 40.2
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 2.0e-35 153.7 260 42.3
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 3.4e-35 152.9 282 41.1
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 3.4e-35 152.9 264 39.8
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 4.5e-35 152.5 271 40.2
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 7.6e-35 151.8 274 37.6
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 1.7e-34 150.6 273 40.7
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 1.7e-34 150.6 272 37.9
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.9e-34 149.8 275 39.6
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 2.9e-34 149.8 278 37.1
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 6.5e-34 148.7 270 38.5
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 1.9e-33 147.1 277 36.1
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 1.9e-33 147.1 273 37.4
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.5e-33 146.7 272 39.3
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 9.3e-33 144.8 267 37.8
HPP92_011269 Vanilla planifolia HOM05D002640 ORTHO05D003231 7.9e-32 141.7 230 40.9
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 2.3e-31 140.2 267 36.7
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 3.0e-31 139.8 294 34.7
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 4.3e-30 136.0 278 34.9
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 1.1e-28 131.3 286 34.6
RcHm_v2.0_Chr2g0087931 Rosa chinensis HOM05D002640 ORTHO05D003231 3.1e-28 129.8 113 61.1
FAN23G0365 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.2e-27 127.9 243 42.0
FAN23G1026 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.2e-27 127.9 243 42.0
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 5.0e-26 122.5 282 29.8
C02p21400 Brassica napus HOM05D002640 ORTHO05D003231 3.2e-25 119.8 103 64.1
BolC2t08277H Brassica oleracea HOM05D002640 ORTHO05D003231 3.2e-25 119.8 103 64.1
BcaC03g14705 Brassica carinata HOM05D002640 ORTHO05D003231 6.7e-23 112.1 99 61.6
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 2.5e-22 110.2 63 82.5
Pp3c5_24480 Physcomitrium patens HOM05D002640 ORTHO05D003231 4.3e-22 109.4 280 32.9
GSVIVG01012381001 Vitis vinifera HOM05D002640 ORTHO05D003231 2.8e-21 106.7 74 70.3
MD00G1025500 Malus domestica HOM05D002640 ORTHO05D003231 1.4e-20 104.4 61 83.6
FAN28G2934 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.8e-20 104.0 97 57.7
MBI11_g01739_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 4.1e-20 102.8 61 80.3
MBI19_g22500_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 2.6e-19 100.1 83 61.4
MBI19_g47879_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 4.5e-19 99.4 71 69.0
Psat3g019400 Pisum sativum HOM05D002640 ORTHO05D003231 7.7e-19 98.6 207 37.7
BcaNung05952 Brassica carinata HOM05D002640 ORTHO05D003231 1.3e-18 97.8 172 40.1
Medtr7g087475 Medicago truncatula HOM05D002640 ORTHO05D003231 8.5e-18 95.1 62 75.8
TPR.G26612 Trifolium pratense HOM05D002640 ORTHO05D003231 8.5e-18 95.1 62 77.4
FAN28G2687 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.7e-13 80.9 87 57.5
Medtr7g087460 Medicago truncatula HOM05D002640 ORTHO05D003231 1.7e-13 80.9 179 38.0
FAN26G1225 Fragaria x ananassa HOM05D002640 ORTHO05D003231 9.1e-12 75.1 79 55.7
CBR_g876 Chara braunii HOM05D002640 ORTHO05D003231 1.2e-11 74.7 115 33.9
TPR.G30283 Trifolium pratense HOM05D002640 ORTHO05D003231 1.8e-07 60.8 139 38.8


User provided reference genes

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