Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g14198_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.4e-101 371.7 195 100.0
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.2e-46 189.1 172 62.8
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 7.1e-38 161.4 172 52.9
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 1.2e-37 160.6 172 52.9
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 1.6e-37 160.2 171 53.8
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 1.6e-37 160.2 172 52.9
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 2.1e-37 159.8 172 52.3
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 3.5e-37 159.1 172 51.7
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 6.0e-37 158.3 172 51.7
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 7.8e-37 157.9 172 51.7
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.0e-36 157.5 174 51.7
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 1.0e-36 157.5 171 53.2
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 1.7e-36 156.8 172 51.2
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 2.3e-36 156.4 172 51.7
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.3e-36 156.4 171 52.6
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 3.0e-36 156.0 172 52.3
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 3.9e-36 155.6 171 52.6
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.9e-36 155.6 171 52.6
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.9e-36 155.6 172 51.2
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 3.9e-36 155.6 171 52.6
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 6.6e-36 154.8 172 52.3
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 8.6e-36 154.5 171 49.1
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.1e-35 154.1 172 51.2
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 1.1e-35 154.1 172 52.9
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.1e-35 154.1 171 52.0
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 1.5e-35 153.7 171 50.9
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 1.9e-35 153.3 172 50.6
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 4.3e-35 152.1 171 50.3
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 4.3e-35 152.1 172 50.6
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 4.3e-35 152.1 172 50.6
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 4.3e-35 152.1 172 50.6
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 5.6e-35 151.8 171 51.5
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 5.6e-35 151.8 172 51.2
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 7.3e-35 151.4 171 51.5
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 7.3e-35 151.4 172 50.0
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 7.3e-35 151.4 171 50.3
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 9.6e-35 151.0 173 48.0
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 9.6e-35 151.0 171 49.7
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 9.6e-35 151.0 171 49.7
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.2e-34 150.6 170 48.8
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 1.2e-34 150.6 172 50.6
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 1.2e-34 150.6 171 49.7
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 1.2e-34 150.6 171 50.9
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.6e-34 150.2 171 49.1
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 1.6e-34 150.2 171 49.1
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 1.6e-34 150.2 172 50.0
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 1.6e-34 150.2 172 48.8
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 1.6e-34 150.2 172 49.4
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-34 150.2 172 51.2
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 1.6e-34 150.2 172 50.0
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 2.1e-34 149.8 162 51.9
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 2.1e-34 149.8 172 48.8
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 2.1e-34 149.8 171 49.7
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 2.8e-34 149.4 172 48.8
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 2.8e-34 149.4 171 50.3
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 3.6e-34 149.1 171 50.9
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 6.2e-34 148.3 172 49.4
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 8.1e-34 147.9 173 48.6
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 8.1e-34 147.9 172 48.8
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 1.1e-33 147.5 171 49.1
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 1.1e-33 147.5 172 50.0
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 1.1e-33 147.5 167 50.3
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.1e-33 147.5 172 48.8
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 1.1e-33 147.5 172 48.3
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 1.4e-33 147.1 171 48.5
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 1.4e-33 147.1 172 48.8
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-33 147.1 172 48.8
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-33 147.1 172 48.8
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 1.4e-33 147.1 172 48.3
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.8e-33 146.7 172 48.8
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 2.4e-33 146.4 167 49.7
C02p17450 Brassica napus HOM05D002640 ORTHO05D003231 2.4e-33 146.4 167 49.7
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 3.1e-33 146.0 172 48.3
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 3.1e-33 146.0 167 49.7
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 4.0e-33 145.6 169 49.1
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 4.0e-33 145.6 169 49.1
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 5.2e-33 145.2 171 46.2
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 5.2e-33 145.2 172 48.8
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 5.2e-33 145.2 172 48.8
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 6.9e-33 144.8 172 47.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 9.0e-33 144.4 172 49.4
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 9.0e-33 144.4 171 47.4
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 1.2e-32 144.1 170 48.2
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.2e-32 144.1 171 49.7
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 1.5e-32 143.7 172 48.3
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 2.0e-32 143.3 170 47.6
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 2.6e-32 142.9 172 50.6
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 3.4e-32 142.5 170 47.6
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 3.4e-32 142.5 318 35.2
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 3.4e-32 142.5 170 47.6
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 4.4e-32 142.1 167 47.9
MBI18_g13239_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D000011 4.4e-32 142.1 79 88.6
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 5.8e-32 141.7 173 48.0
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 5.8e-32 141.7 167 47.9
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 5.8e-32 141.7 170 46.5
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 7.6e-32 141.4 170 47.1
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 7.6e-32 141.4 170 47.1
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 7.6e-32 141.4 169 47.3
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 7.6e-32 141.4 170 47.1
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 7.6e-32 141.4 170 47.1
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 7.6e-32 141.4 170 47.1
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 9.9e-32 141.0 169 47.3
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 1.3e-31 140.6 170 47.1
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 2.2e-31 139.8 170 47.1
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 6.4e-31 138.3 172 45.9
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 1.1e-30 137.5 172 45.3
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 1.9e-30 136.7 172 48.3
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 2.4e-30 136.3 171 45.0
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 2.4e-30 136.3 172 47.1
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 3.2e-30 136.0 170 45.3
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 9.3e-30 134.4 172 43.6
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 3.5e-29 132.5 173 46.2
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 6.0e-29 131.7 171 44.4
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 3.9e-28 129.0 171 45.0
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 3.9e-28 129.0 172 44.2
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 1.9e-27 126.7 171 43.3
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.6e-26 123.6 171 43.3
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.1e-26 123.2 164 45.1
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 2.1e-26 123.2 165 41.8
MBI19_g32644_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 2.8e-26 122.9 157 47.8
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 8.1e-26 121.3 172 43.6
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 1.1e-25 120.9 79 75.9
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 1.4e-25 120.6 168 45.8
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 3.1e-25 119.4 170 41.8
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 7.6e-24 114.8 215 39.1
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.3e-23 114.0 170 40.6
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 8.4e-23 111.3 170 38.2
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.1e-22 110.9 169 39.1
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 1.4e-22 110.5 167 40.1
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.2e-22 109.4 166 39.8
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 7.1e-22 108.2 174 40.2
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 9.3e-22 107.8 172 38.4
Medtr7g087460 Medicago truncatula HOM05D002640 ORTHO05D003231 3.5e-21 105.9 89 60.7
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.8e-20 103.6 168 39.3
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 5.6e-19 98.6 170 39.4
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 9.6e-19 97.8 170 35.9
Actinidia17864 Actinidia chinensis HOM05D002640 ORTHO05D003231 3.7e-18 95.9 130 44.6
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 8.1e-18 94.7 131 42.0
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 1.4e-17 94.0 85 52.9
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 3.1e-17 92.8 167 37.1
FAN23G1577 Fragaria x ananassa HOM05D002640 ORTHO05D006510 2.0e-16 90.1 173 37.6
FAN23G2835 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.0e-16 90.1 173 37.6
FvH4_1g02480 Fragaria vesca HOM05D002640 ORTHO05D003231 5.8e-16 88.6 173 37.6
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 9.9e-16 87.8 159 34.6
FAN19G1577 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.7e-15 87.0 168 37.5
HPP92_011268 Vanilla planifolia HOM05D002640 ORTHO05D003231 2.9e-15 86.3 136 41.2
FAN28G1503 Fragaria x ananassa HOM05D002640 ORTHO05D003231 4.9e-15 85.5 187 35.3
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 8.4e-15 84.7 157 33.1
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 1.4e-14 84.0 159 34.0
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 7.1e-14 81.6 159 34.0
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 9.3e-14 81.3 72 54.2
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 2.7e-13 79.7 159 33.3
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 3.5e-13 79.3 248 29.8
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 3.5e-13 79.3 109 42.2
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 1.3e-12 77.4 151 35.8
ECA236G2013 Erigeron canadensis HOM05D002640 ORTHO05D003231 1.8e-12 77.0 43 76.7
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 3.9e-12 75.9 122 41.0
Psat3g019400 Pisum sativum HOM05D002640 ORTHO05D003231 3.9e-12 75.9 59 62.7
TPR.G25549 Trifolium pratense HOM05D002640 ORTHO05D003231 6.7e-12 75.1 48 72.9
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 6.7e-12 75.1 159 31.4
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 3.3e-11 72.8 159 32.1
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 8.2e-10 68.2 151 31.8
RcHm_v2.0_Chr2g0087911 Rosa chinensis HOM05D002640 ORTHO05D003231 1.1e-09 67.8 111 38.7
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 2.4e-09 66.6 156 31.4
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 2.4e-09 66.6 159 28.9
Pp3c5_24480 Physcomitrium patens HOM05D002640 ORTHO05D003231 1.0e-07 61.2 155 31.6
FAN23G0365 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.3e-07 60.8 112 38.4
FAN23G1026 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.3e-07 60.8 112 38.4
FAN26G2883 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.3e-07 60.8 112 38.4
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 1.7e-07 60.5 152 31.6
RcHm_v2.0_Chr6g0275851 Rosa chinensis HOM05D002640 ORTHO05D003231 1.7e-07 60.5 91 41.8
CBR_g876 Chara braunii HOM05D002640 ORTHO05D003231 3.8e-07 59.3 163 30.1
FAN28G2687 Fragaria x ananassa HOM05D002640 ORTHO05D003231 6.5e-07 58.5 94 37.2
FvH4_1g02810 Fragaria vesca HOM05D002640 ORTHO05D003231 1.1e-06 57.8 94 37.2
CDE09G1137 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 4.2e-06 55.8 37 70.3


User provided reference genes

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