Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2986 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.1e-100 369.0 183 100.0
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 7.1e-32 141.4 119 59.7
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 9.3e-32 141.0 119 60.5
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 1.2e-31 140.6 162 48.1
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 2.1e-31 139.8 99 66.7
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 3.5e-31 139.0 119 58.8
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 3.5e-31 139.0 119 59.7
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 4.6e-31 138.7 99 65.7
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 4.6e-31 138.7 99 67.7
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 6.0e-31 138.3 99 66.7
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 7.9e-31 137.9 99 64.6
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 1.0e-30 137.5 99 66.7
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.0e-30 137.5 99 67.7
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.0e-30 137.5 99 67.7
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.0e-30 137.5 99 67.7
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 1.0e-30 137.5 103 61.2
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 1.0e-30 137.5 99 66.7
FAN23G2835 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.8e-30 136.7 101 66.3
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 2.3e-30 136.3 120 56.7
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 2.3e-30 136.3 99 66.7
FAN19G1577 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.3e-30 136.3 101 66.3
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.3e-30 136.3 99 66.7
FAN28G1503 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.3e-30 136.3 101 66.3
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 2.3e-30 136.3 119 56.3
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 2.3e-30 136.3 119 56.3
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 2.3e-30 136.3 99 66.7
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 3.9e-30 135.6 98 64.3
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 3.9e-30 135.6 99 64.6
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 3.9e-30 135.6 119 59.7
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 5.1e-30 135.2 99 65.7
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 5.1e-30 135.2 119 57.1
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 5.1e-30 135.2 99 65.7
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 5.1e-30 135.2 162 46.9
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 5.1e-30 135.2 99 65.7
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 5.1e-30 135.2 99 63.6
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 6.7e-30 134.8 99 65.7
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 6.7e-30 134.8 119 58.0
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 6.7e-30 134.8 98 66.3
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 6.7e-30 134.8 119 57.1
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 6.7e-30 134.8 119 55.5
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 6.7e-30 134.8 119 58.0
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 6.7e-30 134.8 99 65.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 8.7e-30 134.4 99 63.6
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 8.7e-30 134.4 162 45.7
MD00G1025500 Malus domestica HOM05D002640 ORTHO05D003231 8.7e-30 134.4 99 65.7
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 1.1e-29 134.0 119 57.1
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 1.1e-29 134.0 119 58.0
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 1.5e-29 133.7 119 57.1
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 1.5e-29 133.7 119 57.1
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 1.5e-29 133.7 119 57.1
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 1.5e-29 133.7 95 67.4
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 1.5e-29 133.7 115 60.9
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 1.5e-29 133.7 119 55.5
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 1.5e-29 133.7 99 63.6
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 1.5e-29 133.7 99 60.6
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.9e-29 133.3 162 46.3
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 1.9e-29 133.3 162 46.3
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 1.9e-29 133.3 162 46.3
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 1.9e-29 133.3 162 45.7
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.9e-29 133.3 119 58.0
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 1.9e-29 133.3 119 58.0
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 1.9e-29 133.3 119 55.5
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 2.5e-29 132.9 162 45.7
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 2.5e-29 132.9 162 45.7
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 2.5e-29 132.9 99 64.6
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 2.5e-29 132.9 103 60.2
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 2.5e-29 132.9 119 56.3
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 2.5e-29 132.9 103 59.2
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 2.5e-29 132.9 119 57.1
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 2.5e-29 132.9 119 56.3
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 2.5e-29 132.9 115 60.0
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 2.5e-29 132.9 115 60.0
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 2.5e-29 132.9 115 60.9
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 3.3e-29 132.5 119 55.5
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 3.3e-29 132.5 115 60.0
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 3.3e-29 132.5 162 45.7
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 3.3e-29 132.5 119 57.1
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 3.3e-29 132.5 99 64.6
MBI11_g01739_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.3e-29 132.5 103 59.2
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 3.3e-29 132.5 162 45.7
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 3.3e-29 132.5 99 62.6
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 4.3e-29 132.1 99 61.6
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 4.3e-29 132.1 119 54.6
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 4.3e-29 132.1 120 55.8
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 4.3e-29 132.1 99 64.6
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 5.6e-29 131.7 119 55.5
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 5.6e-29 131.7 162 45.7
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 5.6e-29 131.7 99 63.6
Medtr7g087475 Medicago truncatula HOM05D002640 ORTHO05D003231 5.6e-29 131.7 120 55.8
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 7.4e-29 131.3 119 55.5
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 7.4e-29 131.3 100 60.0
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 7.4e-29 131.3 99 63.6
TPR.G26612 Trifolium pratense HOM05D002640 ORTHO05D003231 7.4e-29 131.3 120 55.0
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 9.6e-29 131.0 119 54.6
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 9.6e-29 131.0 119 55.5
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 9.6e-29 131.0 99 62.6
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 9.6e-29 131.0 119 55.5
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 9.6e-29 131.0 99 63.6
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.3e-28 130.6 119 55.5
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 1.3e-28 130.6 119 55.5
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.3e-28 130.6 119 58.0
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 1.3e-28 130.6 103 59.2
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 1.3e-28 130.6 99 63.6
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.3e-28 130.6 119 58.0
BcaNung05532 Brassica carinata HOM05D002640 ORTHO05D003231 1.6e-28 130.2 162 46.9
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-28 130.2 99 63.6
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-28 130.2 99 63.6
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 1.6e-28 130.2 99 63.6
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 2.1e-28 129.8 119 57.1
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 2.1e-28 129.8 119 52.9
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 2.1e-28 129.8 119 54.6
BcaC03g14705 Brassica carinata HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
C02p17450 Brassica napus HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
C02p21400 Brassica napus HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
BolC2t08277H Brassica oleracea HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 2.8e-28 129.4 162 45.1
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 3.7e-28 129.0 119 55.5
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 3.7e-28 129.0 95 64.2
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 3.7e-28 129.0 119 55.5
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 4.8e-28 128.6 119 53.8
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 6.2e-28 128.3 119 56.3
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 6.2e-28 128.3 119 53.8
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 6.2e-28 128.3 119 54.6
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 6.2e-28 128.3 119 53.8
COL.COLO4_25705 Corchorus olitorius HOM05D002640 ORTHO05D003231 1.1e-27 127.5 119 53.8
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 1.4e-27 127.1 118 55.1
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 1.4e-27 127.1 119 52.9
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 1.4e-27 127.1 99 60.6
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 1.8e-27 126.7 120 54.2
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 1.8e-27 126.7 119 53.8
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 5.3e-27 125.2 99 56.6
MBI19_g47879_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 6.9e-27 124.8 119 52.9
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 9.0e-27 124.4 99 61.6
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 9.0e-27 124.4 176 42.6
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.2e-26 124.0 93 60.2
RcHm_v2.0_Chr2g0087931 Rosa chinensis HOM05D002640 ORTHO05D003231 1.2e-26 124.0 88 68.2
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 2.0e-26 123.2 113 53.1
FvH4_1g02480 Fragaria vesca HOM05D002640 ORTHO05D003231 2.6e-26 122.9 88 67.0
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 3.4e-26 122.5 99 56.6
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.4e-26 122.5 106 54.7
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 3.4e-26 122.5 119 49.6
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 4.5e-26 122.1 95 62.1
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 4.5e-26 122.1 99 60.6
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 5.8e-26 121.7 99 59.6
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 5.8e-26 121.7 99 55.6
HPP92_011269 Vanilla planifolia HOM05D002640 ORTHO05D003231 7.6e-26 121.3 84 63.1
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 9.9e-26 120.9 99 61.6
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.3e-25 120.6 119 52.9
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 1.3e-25 120.6 95 58.9
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 1.3e-25 120.6 99 54.5
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 3.8e-25 119.0 99 58.6
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 4.9e-25 118.6 120 52.5
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 4.9e-25 118.6 106 53.8
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 6.4e-25 118.2 100 54.0
GSVIVG01012381001 Vitis vinifera HOM05D002640 ORTHO05D003231 8.4e-25 117.9 99 57.6
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 1.1e-24 117.5 111 53.2
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 3.2e-24 115.9 95 55.8
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 7.1e-24 114.8 106 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 9.3e-24 114.4 93 57.0
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 1.2e-23 114.0 95 56.8
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 1.6e-23 113.6 95 57.9
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 2.1e-23 113.2 95 56.8
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 2.7e-23 112.8 99 54.5
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 1.3e-22 110.5 95 54.7
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 6.7e-22 108.2 95 55.8
FAN26G1225 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-19 100.5 78 62.8
Pp3c5_24480 Physcomitrium patens HOM05D002640 ORTHO05D003231 2.4e-19 99.8 96 52.1
Actinidia17865 Actinidia chinensis HOM05D002640 ORTHO05D003231 6.9e-19 98.2 82 56.1
CBR_g876 Chara braunii HOM05D002640 ORTHO05D003231 6.9e-19 98.2 99 49.5
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 1.0e-17 94.4 99 49.5
SEGI_17703 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 4.9e-17 92.0 82 50.0
FvH4_1g02810 Fragaria vesca HOM05D002640 ORTHO05D003231 2.5e-16 89.7 76 61.8
FAN19G3161 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.5e-16 89.7 76 61.8
CDE09G1137 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 4.2e-16 89.0 110 43.6
Psat3g019400 Pisum sativum HOM05D002640 ORTHO05D003231 5.7e-13 78.6 59 57.6
MCO05G283 Micromonas commoda HOM05D002640 ORTHO05D003231 2.4e-11 73.2 90 42.2
FAN07G2352 Fragaria x ananassa HOM05D000639 ORTHO05D005322 3.1e-11 72.8 32 96.9
SEGI_22762 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 6.5e-09 65.1 73 43.8
Cfa022608 Carpinus fangiana HOM05D002640 ORTHO05D003231 1.4e-08 63.9 99 34.3
RcHm_v2.0_Chr2g0087481 Rosa chinensis HOM05D002640 ORTHO05D003231 1.9e-08 63.5 47 70.2
FAN28G2183 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.5e-08 63.2 47 68.1
RcHm_v2.0_Chr2g0087901 Rosa chinensis HOM05D002640 ORTHO05D003231 3.2e-08 62.8 47 66.0
PRCOL_00004004 Prasinoderma coloniale HOM05D002640 ORTHO05D003231 7.2e-08 61.6 114 31.6
MBI19_g22500_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 1.2e-07 60.8 68 47.1
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 3.0e-06 56.2 39 59.0


User provided reference genes

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