Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM01G55480
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM01G55480 ZM05G02940 ZM07G01960 | 3 |  |
| Anchor point | ZM05G02940 ZM01G46310 ZM07G01960 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM01G55480 ZM05G02940 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G01960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00004G01960 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G06140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G06140 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G06490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G06490 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G67010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G67010 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G04350 BR03G17730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G04350 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G05280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G05280 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP01467G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01467G00030 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G08840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G08840 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00018G01200 | 1 | |
| Anchor point | many-to-1 | CS00018G01200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G01200 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00068G01420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00068G01420 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G15810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G15810 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G28780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G28780 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM03G36170 | 1 | |
| Anchor point | many-to-1 | GM03G36170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G10280 GM02G35090 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G14830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G14830 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G011170 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G106900 MD14G003940 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G106900 MD14G003940 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02892G00960 ME08542G00720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08542G00720 ME02892G00960 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G056350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G056350 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G57410 OS07G06560 | 2 | |
| Anchor point | many-to-1 | OS03G57410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G57410 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G04980 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00041G01300 PP00014G00810 | 2 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G20150 PT16G06790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G06790 PT06G20150 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G11470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G28180 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29333G00260 | 1 | |
| Anchor point | many-to-1 | RC29333G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29333G00260 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G081790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G081790 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G026320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G026330 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G36370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G36370 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G10600 | 1 | |
| Anchor point | many-to-1 | TC0005G10600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G10600 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G05380 | 1 | |