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Integrative Orthology Viewer:
TC0010G02900
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0010G02900 TC0010G09990 | 2 |  |
| Anchor point | TC0005G02740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0010G02900 TC0010G09990 | 2 | ||
| Tree-based ortholog | TC0010G02900 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00165G00290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00165G00290 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00165G00290 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-many | AL4G24000 AL6G05560 AL5G24020 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G05560 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL6G05560 | 1 | ||
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G05960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G05960 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G05960 | 1 | ||
| Beta vulgaris | Anchor point | 1-to-1 | BV2G06080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV2G06080 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV2G06080 | 1 | ||
| Brassica rapa | Anchor point | 1-to-many | BR10G24200 BR05G07410 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G05040 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR10G24200 | 1 | ||
| Capsella rubella | Anchor point | 1-to-many | CRU_005G19350 CRU_006G04720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G04720 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_006G04720 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00017G01430 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00017G01430 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G06730 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G06730 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-many | CS00021G01590 CS00083G00240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00021G01590 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00021G01590 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00008G01960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00008G01960 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00008G01960 | 1 | ||
| Eucalyptus grandis | Anchor point | 1-to-many | EG0007G23790 EG0011G25580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0007G23790 EG0007G23810 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0007G23810 EG0007G23790 | 2 | ||
| Fragaria vesca | Anchor point | 1-to-many | FV7G28450 FV6G11930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G28450 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G28450 | 1 | ||
| Glycine max | Anchor point | 1-to-many | GM07G16770 GM18G41320 GM01G25980 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G16770 GM18G41320 | 2 | ||
| Tree-based ortholog | 1-to-many | GM07G16770 GM18G41320 GM01G25980 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR11G27390 GR11G27410 GR11G27780 ... | 4 | |
| Anchor point | 1-to-many | GR12G07360 GR06G17820 GR11G27390 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR11G27810 GR11G27780 GR11G27410 ... | 4 | ||
| Tree-based ortholog | 1-to-many | GR11G27810 GR11G27390 GR11G27780 ... | 4 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G392600 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G392600 | 1 | ||
| Manihot esculenta | Anchor point | 1-to-1 | ME08265G02650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME08265G02650 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME08265G02650 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G065160 MT7G065210 | 2 | |
| Tree-based ortholog | 1-to-many | MT7G065210 MT7G065160 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G62980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G62980 | 1 | ||
| Tree-based ortholog | 1-to-many | OS05G06780 OS04G33920 OS04G33930 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00039G01220 PP00232G00020 PP00232G00010 ... | 4 | |
| Populus trichocarpa | Anchor point | 1-to-many | PT10G19630 PT06G09250 PT08G06180 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT10G19630 PT08G06180 | 2 | ||
| Tree-based ortholog | 1-to-many | PT08G06180 PT10G19630 | 2 | ||
| Prunus persica | Anchor point | 1-to-many | PPE_002G23330 PPE_006G27200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G27200 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G23340 | 1 | ||
| Ricinus communis | Anchor point | 1-to-1 | RC30143G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30143G00570 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30143G00570 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL03G079880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G079880 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL06G036230 | 1 | ||
| Solanum tuberosum | Anchor point | 1-to-1 | ST03G019630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G019630 | 1 | ||
| Tree-based ortholog | 1-to-many | ST06G016490 ST03G019630 | 2 | ||
| Thellungiella parvula | Anchor point | 1-to-many | TP6G36940 TP5G08420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G36940 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP6G36940 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV13G04390 VV08G13720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G04390 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV13G04390 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM03G26910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G26910 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM02G22780 ZM01G09210 ZM02G15810 | 3 |