Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL09G011270
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL09G011270 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL09G011270 | 1 | ||
| Tree-based ortholog | SL09G011270 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00012G03410 ATR_00012G03420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00012G03420 ATR_00012G03410 | 2 | ||
| Tree-based ortholog | 1-to-many | ATR_00012G03410 ATR_00012G03420 | 2 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G22260 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G22260 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G37820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G37820 | 1 | ||
| Tree-based ortholog | 1-to-many | AT2G37780 AT2G37810 AT2G37800 ... | 4 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G05760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05760 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV4G05760 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G07450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G07450 | 1 | ||
| Tree-based ortholog | 1-to-many | BR03G18680 BR05G07480 BR03G18690 ... | 5 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G19140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G19140 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G19140 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00062G00910 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00062G00910 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G07770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07770 | 1 | ||
| Tree-based ortholog | 1-to-many | CL04G07770 CL04G07780 CL04G07760 | 3 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00280G00020 CS00280G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00280G00030 CS00280G00020 | 2 | ||
| Tree-based ortholog | 1-to-many | CS00280G00020 CS00280G00030 | 2 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00002G00970 CM00002G01010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01010 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00002G01010 CM00002G00970 CM00002G00980 ... | 4 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G09800 | 1 | |
| Tree-based ortholog | 1-to-many | EG0006G30810 EG0006G15780 | 2 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G00520 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G28020 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G05090 GM11G13000 | 2 | |
| Tree-based ortholog | 1-to-many | GM07G19730 GM20G00880 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR12G10780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G26340 | 1 | ||
| Tree-based ortholog | 1-to-many | GR07G35960 GR03G09340 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G046360 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G059950 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G006820 MD10G005940 MD00G394330 | 3 | |
| Tree-based ortholog | 1-to-1 | MD00G228720 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01012G00050 | 1 | |
| Tree-based ortholog | 1-to-many | ME01012G00050 ME06201G00010 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G034390 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G034960 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS07G42070 OS07G42030 OS07G41930 | 3 | |
| Tree-based ortholog | 1-to-many | OS07G42070 OS07G42030 OS07G41930 ... | 5 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00096G00950 PP00108G00170 PP00208G00610 ... | 4 | |
| Tree-based ortholog | 1-to-1 | PP00365G00030 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT10G19820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G19820 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT10G19820 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G12650 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G00260 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29851G01050 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30170G07560 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G008710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G008710 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST09G008710 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G18690 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G20150 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0005G03060 TC0005G03070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0005G03070 TC0005G03060 | 2 | ||
| Tree-based ortholog | 1-to-many | TC0005G03060 TC0005G03070 | 2 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G13920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13920 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G13920 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G44750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G32880 ZM07G18120 | 2 | ||
| Tree-based ortholog | 1-to-1 | ZM09G26980 | 1 |