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Integrative Orthology Viewer:
SL05G009240
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL04G007290 SL05G009240 | 2 |  |
| Anchor point | SL03G119400 SL04G007290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL05G009240 | 1 | ||
| Tree-based ortholog | SL05G009240 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00930 | 1 | |
| Anchor point | many-to-1 | ATR_00079G00490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00930 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00004G00930 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G00920 | 1 | |
| Anchor point | many-to-1 | AL3G19860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G00920 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G00920 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G21720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G21720 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G21720 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G21600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G21600 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV5G21600 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G12120 BR09G44330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G12120 | 1 | ||
| Tree-based ortholog | 1-to-many | BR09G44330 BR04G12120 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G00740 | 1 | |
| Anchor point | many-to-1 | CRU_003G17330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G00740 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G00740 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00161G00160 | 1 | |
| Anchor point | many-to-1 | CP00003G04950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00161G00160 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00161G00160 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G05520 | 1 | |
| Anchor point | many-to-1 | CL06G15330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G05520 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G05520 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00029G01410 | 1 | |
| Anchor point | many-to-1 | CS00008G00940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G01410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00029G01410 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00010G00360 CM00010G00370 | 2 | |
| Anchor point | many-to-1 | CM00030G02430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G00360 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00010G00370 CM00010G00360 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G17740 | 1 | |
| Anchor point | many-to-1 | EG0002G06310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G17740 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0001G17740 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV1G22850 | 1 | |
| Anchor point | many-to-1 | FV5G35930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G22850 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV1G22850 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM16G04180 GM19G29220 | 2 | |
| Anchor point | many-to-many | GM07G10300 GM09G31590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G04180 GM19G29220 | 2 | ||
| Tree-based ortholog | 1-to-many | GM19G29220 GM16G04180 GM08G36301 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G25180 GR07G25700 | 2 | |
| Anchor point | many-to-1 | GR06G06050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G25700 | 1 | ||
| Tree-based ortholog | 1-to-many | GR04G25180 GR07G25700 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G054880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G054880 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G054880 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G309470 MD12G000910 | 2 | |
| Anchor point | many-to-many | MD06G018170 MD14G021310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G000910 MD00G309470 | 2 | ||
| Tree-based ortholog | 1-to-many | MD12G000910 MD00G309470 MD12G000900 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03614G02010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G02010 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME03614G02010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G086350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G086350 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G006750 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G06180 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G06180 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00028G02110 PP00364G00220 | 2 | |
| Tree-based ortholog | 1-to-1 | PP00097G00510 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT13G06270 | 1 | |
| Anchor point | many-to-many | PT15G04650 PT12G05580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G06270 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT13G06270 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G02300 | 1 | |
| Anchor point | many-to-1 | PPE_005G22460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G02300 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_007G02300 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30072G00340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30072G00340 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30072G00340 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G006510 ST05G008180 | 2 | |
| Anchor point | many-to-many | ST05G008180 ST04G006510 ST03G032950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G008180 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST05G008180 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G00880 | 1 | |
| Anchor point | many-to-1 | TP3G16460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G00880 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP4G00880 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G24440 | 1 | |
| Anchor point | many-to-1 | TC0003G03510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G24440 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0005G24440 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G05430 | 1 | |
| Anchor point | many-to-1 | VV17G06070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G05430 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G05430 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G26450 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM03G25770 | 1 |