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Integrative Orthology Viewer:
PT17G01670
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT07G13530 PT17G01670 | 2 |  |
| Anchor point | PT04G04930 PT07G13530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G01670 PT07G13530 | 2 | ||
| Tree-based ortholog | PT07G13530 PT17G01670 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00021G01800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00021G01800 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00021G01800 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G13310 | 1 | |
| Anchor point | many-to-many | AL1G29690 AL7G13310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G13310 | 1 | ||
| Tree-based ortholog | many-to-1 | AL7G13310 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G28500 | 1 | |
| Anchor point | many-to-many | AT4G28500 AT1G28470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G28500 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G28500 | 1 | ||
| Beta vulgaris | Anchor point | many-to-1 | BV8G11650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV8G05840 | 1 | ||
| Tree-based ortholog | many-to-1 | BV8G05840 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G08620 BR03G50390 | 2 | |
| Anchor point | many-to-many | BR09G17770 BR03G50390 BR01G08620 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR01G08620 BR03G50390 | 2 | ||
| Tree-based ortholog | many-to-many | BR01G08620 BR03G50390 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G11480 | 1 | |
| Anchor point | many-to-many | CRU_007G11480 CRU_001G25880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G11480 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_007G11480 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00083G00980 | 1 | |
| Anchor point | many-to-1 | CP00083G00980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00083G00980 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00083G00980 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL00G02830 | 1 | |
| Anchor point | many-to-1 | CL01G23400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL00G02830 | 1 | ||
| Tree-based ortholog | many-to-1 | CL00G02830 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00235G00100 | 1 | |
| Anchor point | many-to-1 | CS00235G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00235G00100 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00235G00100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00037G01500 | 1 | |
| Anchor point | many-to-many | CM00007G02770 CM00037G01500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00037G01500 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00037G01500 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G08900 | 1 | |
| Anchor point | many-to-many | EG0004G04680 EG0011G08900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G08900 | 1 | ||
| Tree-based ortholog | many-to-many | EG0011G08900 EG0004G04720 EG0004G04710 ... | 6 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G22010 | 1 | |
| Anchor point | many-to-1 | FV6G22010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G22010 | 1 | ||
| Tree-based ortholog | many-to-1 | FV6G22010 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G44250 GM12G33460 GM13G36980 | 3 | |
| Anchor point | many-to-many | GM12G33460 GM15G08480 GM13G30800 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM06G44250 GM12G13710 | 2 | ||
| Tree-based ortholog | many-to-many | GM06G44250 GM12G13710 GM12G33460 ... | 8 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G15520 | 1 | |
| Anchor point | many-to-many | GR08G15520 GR10G15760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G15520 | 1 | ||
| Tree-based ortholog | many-to-1 | GR08G15520 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G039990 | 1 | |
| Anchor point | many-to-1 | LJ3G039990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G010300 | 1 | ||
| Tree-based ortholog | many-to-many | LJ3G039990 LJ6G026900 LJ6G026360 ... | 4 | ||
| Malus domestica | Anchor point | many-to-1 | MD10G023170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD10G023170 MD05G004800 | 2 | ||
| Tree-based ortholog | many-to-many | MD05G004800 MD10G023170 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME02307G00130 | 1 | |
| Anchor point | many-to-many | ME02307G00130 ME04851G00530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02307G00130 | 1 | ||
| Tree-based ortholog | many-to-many | ME02307G00130 ME12216G00030 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT2G090735 | 1 | |
| Anchor point | many-to-many | MT4G088245 MT4G078875 MT2G014680 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G090735 | 1 | ||
| Tree-based ortholog | many-to-many | MT4G078875 MT2G090735 MT2G014680 ... | 5 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G48130 | 1 | |
| Anchor point | many-to-1 | OS05G48850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G48130 | 1 | ||
| Tree-based ortholog | many-to-many | OS05G48850 OS01G48130 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00251G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00251G00100 | 1 | ||
| Tree-based ortholog | many-to-1 | PP00251G00100 | 1 | ||
| Prunus persica | Anchor point | many-to-1 | PPE_004G05060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G05060 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_004G05060 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29983G00230 | 1 | |
| Anchor point | many-to-many | RC30190G00030 RC29983G00230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29983G00230 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29983G00230 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G053590 | 1 | |
| Anchor point | many-to-many | SL02G077610 SL07G053590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G077610 | 1 | ||
| Tree-based ortholog | many-to-many | SL07G053590 SL02G077610 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G021660 | 1 | |
| Anchor point | many-to-many | ST02G020450 ST07G021660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G020450 | 1 | ||
| Tree-based ortholog | many-to-many | ST07G021660 ST02G020450 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G26480 | 1 | |
| Anchor point | many-to-many | TP1G24720 TP7G26480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G26480 | 1 | ||
| Tree-based ortholog | many-to-1 | TP7G26480 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G18180 | 1 | |
| Anchor point | many-to-many | TC0002G18180 TC0006G17620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G18180 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0002G18180 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV12G02070 | 1 | |
| Anchor point | many-to-many | VV10G01470 VV12G02070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G02070 | 1 | ||
| Tree-based ortholog | many-to-1 | VV12G02070 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G35300 | 1 | |
| Anchor point | many-to-1 | ZM06G31080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G35300 | 1 | ||
| Tree-based ortholog | many-to-many | ZM06G31080 ZM03G35300 | 2 |