Integrative Orthology Viewer: PT16G12970 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G07530 PT10G18210 PT16G12970 | 3 | |
Anchor point | PT10G18210 PT08G07530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT16G12970 | 1 | ||
Tree-based ortholog | PT16G12970 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00007G01680 | 1 | |
Anchor point | many-to-1 | ATR_00007G01680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G01680 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00007G01680 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G11390 AL6G04930 | 2 | |
Anchor point | many-to-1 | AL6G04930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G04930 | 1 | ||
Tree-based ortholog | 1-to-many | AL3G11390 AL6G04930 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10980 AT5G05350 | 2 | |
Anchor point | many-to-1 | AT5G05350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05350 | 1 | ||
Tree-based ortholog | 1-to-many | AT3G10980 AT5G05350 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G14110 BV7G10600 | 2 | |
Anchor point | many-to-many | BV7G10600 BV2G09910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G10600 | 1 | ||
Tree-based ortholog | 1-to-1 | BV7G10600 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR05G31550 BR10G23720 | 2 | |
Anchor point | many-to-1 | BR10G23720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G31550 | 1 | ||
Tree-based ortholog | 1-to-many | BR05G31550 BR10G23720 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G09820 CRU_006G04160 | 2 | |
Anchor point | many-to-1 | CRU_006G04160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G09820 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_003G09820 CRU_006G04160 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00033G00940 | 1 | |
Anchor point | many-to-many | CP00033G00940 CP00019G01060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00033G00940 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00033G00940 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G01370 | 1 | |
Anchor point | many-to-many | CL04G06550 CL11G01370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01370 | 1 | ||
Tree-based ortholog | 1-to-1 | CL04G06550 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00414G00160 | 1 | |
Anchor point | many-to-1 | CS00414G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00414G00160 | 1 | ||
Tree-based ortholog | 1-to-1 | CS12543G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00040G02210 | 1 | |
Anchor point | many-to-many | CM00040G02210 CM00086G00560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00040G02210 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00086G00560 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G10150 EG0011G10500 | 2 | |
Anchor point | many-to-1 | EG0011G10500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G10500 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0011G10500 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G30550 | 1 | |
Anchor point | many-to-1 | FV7G30550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G30550 | 1 | ||
Tree-based ortholog | 1-to-1 | FV7G30550 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G32020 GM02G42830 GM03G05040 ... | 5 | |
Anchor point | many-to-many | GM18G02600 GM02G42830 GM11G35810 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G42830 | 1 | ||
Tree-based ortholog | 1-to-many | GM03G05040 GM01G32020 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR10G19290 | 1 | |
Anchor point | many-to-1 | GR10G19290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G19290 | 1 | ||
Tree-based ortholog | 1-to-1 | GR10G19290 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G042920 | 1 | |
Anchor point | many-to-1 | LJ2G042920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G042920 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ2G042920 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G015270 MD04G002540 MD12G018920 | 3 | |
Anchor point | many-to-many | MD04G013510 MD01G015270 MD04G002540 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G002540 MD01G015270 | 2 | ||
Tree-based ortholog | 1-to-1 | MD12G018920 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME10689G00230 ME12317G00110 | 2 | |
Anchor point | many-to-many | ME10689G00230 ME12317G00110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10689G00230 ME12317G00110 | 2 | ||
Tree-based ortholog | 1-to-many | ME10689G00230 ME12317G00110 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G072040 MT3G072070 MT5G083740 | 3 | |
Anchor point | many-to-many | MT5G083740 MT3G072040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G083740 | 1 | ||
Tree-based ortholog | 1-to-many | MT3G072070 MT3G072040 MT5G083740 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G39730 | 1 | |
Anchor point | many-to-many | OS05G27570 OS12G01890 OS05G39730 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G39730 | 1 | ||
Tree-based ortholog | 1-to-1 | OS05G39730 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00019G00080 PP00298G00330 PP00353G00040 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00353G00040 PP00298G00330 PP00019G00080 | 3 | ||
Tree-based ortholog | 1-to-many | PP00019G00080 PP00353G00040 PP00360G00070 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G24860 PPE_006G29360 | 2 | |
Anchor point | many-to-many | PPE_006G29360 PPE_002G24860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G24860 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_006G29360 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28092G00030 RC29729G00500 | 2 | |
Anchor point | many-to-1 | RC29729G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28092G00030 | 1 | ||
Tree-based ortholog | 1-to-1 | RC28092G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G048780 SL06G048790 SL06G048810 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G048790 | 1 | ||
Tree-based ortholog | 1-to-many | SL06G048790 SL06G048810 | 2 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G022350 | 1 | |
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G09310 TP6G37480 | 2 | |
Anchor point | many-to-1 | TP6G37480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G09310 | 1 | ||
Tree-based ortholog | 1-to-many | TP3G09310 TP6G37480 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0010G00730 TC0010G00740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G00730 | 1 | ||
Tree-based ortholog | 1-to-many | TC0010G00740 TC0010G00730 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G09710 | 1 | |
Anchor point | many-to-many | VV08G06260 VV13G09710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G09710 | 1 | ||
Tree-based ortholog | 1-to-1 | VV13G09710 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G18150 | 1 | |
Anchor point | many-to-many | ZM01G12760 ZM06G23000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G18150 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM08G18150 | 1 |