Integrative Orthology Viewer: PT12G14250 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G14250 PT15G14570 | 2 | |
Anchor point | PT15G14570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT15G14570 PT12G14250 | 2 | ||
Tree-based ortholog | PT15G14570 PT12G14250 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00009G02290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00009G02290 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00009G02290 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G23700 AL8G16770 | 2 | |
Anchor point | 1-to-many | AL8G16770 AL6G23700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G23700 | 1 | ||
Tree-based ortholog | many-to-1 | AL6G23700 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G23890 AT5G52410 | 2 | |
Anchor point | 1-to-many | AT5G52410 AT5G23890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G23890 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G23890 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G05110 | 1 | |
Anchor point | 1-to-1 | BV3G05110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G05110 | 1 | ||
Tree-based ortholog | many-to-1 | BV3G05110 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G16410 BR02G16410 BR06G25290 | 3 | |
Anchor point | 1-to-many | BR02G16410 BR01G16410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G25290 | 1 | ||
Tree-based ortholog | many-to-many | BR01G16410 BR06G25290 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G20940 CRU_008G12290 | 2 | |
Anchor point | 1-to-1 | CRU_008G12290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G20940 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_006G20940 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00107G00650 | 1 | |
Anchor point | 1-to-1 | CP00107G00650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00107G00650 | 1 | ||
Tree-based ortholog | many-to-1 | CP00107G00650 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-1 | CL05G09350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G09350 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G09350 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00171G00270 | 1 | |
Anchor point | 1-to-1 | CS00171G00270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00171G00270 | 1 | ||
Tree-based ortholog | many-to-1 | CS00171G00270 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G10430 | 1 | |
Anchor point | 1-to-1 | CM00006G10430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G10430 | 1 | ||
Tree-based ortholog | many-to-1 | CM00006G10430 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G23550 | 1 | |
Anchor point | 1-to-1 | EG0001G23550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G23550 | 1 | ||
Tree-based ortholog | many-to-1 | EG0001G23550 | 1 | ||
Fragaria vesca | Anchor point | 1-to-1 | FV7G38320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G38320 | 1 | ||
Tree-based ortholog | many-to-1 | FV7G38320 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G25200 GM10G37851 GM16G30160 ... | 4 | |
Anchor point | 1-to-many | GM16G30160 GM09G25200 GM10G37851 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G25200 GM16G30160 | 2 | ||
Tree-based ortholog | many-to-many | GM20G29971 GM10G37851 GM16G30160 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G11810 GR06G04860 | 2 | |
Anchor point | 1-to-many | GR06G04860 GR04G11810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G04860 | 1 | ||
Tree-based ortholog | many-to-many | GR06G04860 GR04G11810 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G005630 | 1 | |
Anchor point | 1-to-1 | LJ2G005630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G005630 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G005630 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G020430 MD07G018720 MD14G015960 | 3 | |
Anchor point | 1-to-many | MD07G018720 MD01G020430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD07G018720 MD01G020430 | 2 | ||
Tree-based ortholog | many-to-many | MD14G015960 MD01G020430 MD07G018720 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME11179G00370 | 1 | |
Anchor point | 1-to-1 | ME11179G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11179G00370 | 1 | ||
Tree-based ortholog | many-to-1 | ME11179G00370 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT6G053740 | 1 | |
Anchor point | 1-to-1 | MT6G053740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G053740 | 1 | ||
Tree-based ortholog | many-to-1 | MT6G053740 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G64400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G64400 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G64400 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00089G00750 PP00221G00250 PP00335G00110 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00335G00110 PP00419G00150 PP00089G00750 ... | 4 | ||
Tree-based ortholog | many-to-many | PP00419G00150 PP00089G00750 PP00221G00250 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G28380 | 1 | |
Anchor point | 1-to-1 | PPE_002G28380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G28380 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G28380 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30169G04060 | 1 | |
Anchor point | 1-to-1 | RC30169G04060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30169G04060 | 1 | ||
Tree-based ortholog | many-to-1 | RC30169G04060 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G025530 SL06G036040 | 2 | |
Anchor point | 1-to-many | SL06G036030 SL03G025530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G025530 | 1 | ||
Tree-based ortholog | many-to-many | SL06G036040 SL03G025530 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G015300 | 1 | |
Anchor point | 1-to-many | ST03G015300 ST06G015820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G015300 | 1 | ||
Tree-based ortholog | many-to-many | ST06G015830 ST03G015300 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G23390 TP6G14630 | 2 | |
Anchor point | 1-to-many | TP2G23390 TP6G14630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G23390 | 1 | ||
Tree-based ortholog | many-to-1 | TP2G23390 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G18020 | 1 | |
Anchor point | 1-to-1 | TC0003G18020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G18020 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G18020 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV16G08440 | 1 | |
Anchor point | 1-to-1 | VV16G08440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G08440 | 1 | ||
Tree-based ortholog | many-to-1 | VV16G08440 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G60280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G60280 | 1 | ||
Tree-based ortholog | many-to-1 | ZM01G60280 | 1 |