Integrative Orthology Viewer: PT12G07470 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G07470 PT15G06960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT15G06960 PT12G07470 | 2 | ||
Tree-based ortholog | PT15G06960 PT12G07470 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00074G00010 ATR_00226G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00074G00010 ATR_00226G00010 | 2 | ||
Tree-based ortholog | many-to-1 | ATR_00226G00010 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G16890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G16890 | 1 | ||
Tree-based ortholog | many-to-many | AL5G22220 AL5G16890 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G48080 AT3G48090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G48080 | 1 | ||
Tree-based ortholog | many-to-many | AT3G52430 AT3G48080 AT3G48090 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G01990 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G01990 | 1 | ||
Tree-based ortholog | many-to-1 | BV4G07840 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G22950 BR01G22960 BR06G17280 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR01G22960 BR06G17280 | 2 | ||
Tree-based ortholog | many-to-many | BR04G05750 BR03G42480 BR09G33900 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G13310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G13310 | 1 | ||
Tree-based ortholog | many-to-many | CRU_005G17680 CRU_005G17670 CRU_005G13310 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00035G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00035G00170 | 1 | ||
Tree-based ortholog | many-to-1 | CP00035G00170 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G17200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G17200 | 1 | ||
Tree-based ortholog | many-to-1 | CL04G01910 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00020G02060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00020G02060 | 1 | ||
Tree-based ortholog | many-to-1 | CS00020G02060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00030G00520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00030G00520 | 1 | ||
Tree-based ortholog | many-to-1 | CM00010G01600 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0011G24220 EG0011G24230 EG0011G24240 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0011G24220 EG0011G24280 EG0011G24270 ... | 6 | ||
Tree-based ortholog | many-to-many | EG2955G00010 EG0011G24240 EG0011G24230 ... | 7 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G17900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G17900 | 1 | ||
Tree-based ortholog | many-to-1 | FV0G21770 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G34800 GM06G19890 GM06G19900 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM06G19890 | 1 | ||
Tree-based ortholog | many-to-many | GM08G00420 GM05G32756 GM04G38691 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G21760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G21760 | 1 | ||
Tree-based ortholog | many-to-1 | GR08G21760 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G006770 LJ1G006780 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G006780 | 1 | ||
Tree-based ortholog | many-to-many | LJ1G006770 LJ1G006780 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G055460 MD00G439620 MD06G014840 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD06G014850 MD14G018520 | 2 | ||
Tree-based ortholog | many-to-1 | MD15G007230 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01662G00020 ME12794G01520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME01662G00020 ME12794G01520 | 2 | ||
Tree-based ortholog | many-to-many | ME01662G00020 ME12794G01520 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G078633 MT3G079340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G079340 | 1 | ||
Tree-based ortholog | many-to-many | MT00G26600 MT8G494200 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G22450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G22450 | 1 | ||
Tree-based ortholog | many-to-1 | OS11G09010 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00010G00990 | 1 | |
Prunus persica | Orthologous gene family | many-to-many | PPE_005G18630 PPE_005G18650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G18650 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_004G31050 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30147G06960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30147G06960 | 1 | ||
Tree-based ortholog | many-to-1 | RC30147G06960 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G071280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G071280 | 1 | ||
Tree-based ortholog | many-to-1 | SL02G032850 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G027320 ST06G027330 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G027330 | 1 | ||
Tree-based ortholog | many-to-1 | ST02G008670 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G13930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G13930 | 1 | ||
Tree-based ortholog | many-to-many | TP5G09870 TP5G13930 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G00220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G00220 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G00220 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV17G02450 VV17G02570 VV17G02600 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV17G02450 VV17G02620 VV17G02570 ... | 4 | ||
Tree-based ortholog | many-to-1 | VV07G07180 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G30210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G30210 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G22820 ZM04G34400 | 2 |