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Integrative Orthology Viewer:
PT12G05590
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT12G05590 PT15G04660 | 2 |  |
| Anchor point | PT10G12370 PT15G04660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT12G05590 | 1 | ||
| Tree-based ortholog | PT15G04660 PT12G05590 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | many-to-1 | ATR_00079G00470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00079G00470 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00079G00470 | 1 | ||
| Arabidopsis lyrata | Anchor point | many-to-many | AL2G16610 AL3G19870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G19870 | 1 | ||
| Tree-based ortholog | many-to-1 | AL3G19870 | 1 | ||
| Arabidopsis thaliana | Anchor point | many-to-many | AT3G18360 AT1G68450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G18360 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G18360 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G05400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05400 | 1 | ||
| Tree-based ortholog | many-to-1 | BV5G05400 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G31140 | 1 | |
| Tree-based ortholog | many-to-1 | BR01G31140 | 1 | ||
| Capsella rubella | Anchor point | many-to-many | CRU_003G17360 CRU_002G14070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17360 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_003G17360 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00003G04960 CP35103G00010 CP39771G00010 | 3 | |
| Anchor point | many-to-1 | CP00003G04960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00003G04960 CP39771G00010 CP35103G00010 | 3 | ||
| Tree-based ortholog | many-to-many | CP35103G00010 CP00003G04960 CP39771G00010 | 3 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G15340 | 1 | |
| Anchor point | many-to-many | CL06G15340 CL05G23710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G15340 | 1 | ||
| Tree-based ortholog | many-to-1 | CL06G15340 | 1 | ||
| Citrus sinensis | Anchor point | many-to-1 | CS00008G00730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G00730 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00008G00730 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00014G00570 CM00030G02420 | 2 | |
| Anchor point | many-to-1 | CM00030G02420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G00570 | 1 | ||
| Tree-based ortholog | many-to-many | CM00030G02420 CM00014G00570 | 2 | ||
| Eucalyptus grandis | Anchor point | many-to-1 | EG0007G17580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G17580 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0007G17580 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G35940 | 1 | |
| Anchor point | many-to-many | FV5G35940 FV0G01480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G35940 | 1 | ||
| Tree-based ortholog | many-to-1 | FV5G35940 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM07G10290 GM09G31600 | 2 | |
| Anchor point | many-to-many | GM07G10290 GM09G31600 GM20G25070 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G31600 GM07G10290 | 2 | ||
| Tree-based ortholog | many-to-many | GM09G31600 GM07G10290 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G11200 | 1 | |
| Anchor point | many-to-1 | GR09G34750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G11200 | 1 | ||
| Tree-based ortholog | many-to-1 | GR04G11200 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G018330 | 1 | |
| Tree-based ortholog | many-to-many | LJ5G039290 LJ2G018330 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD06G018160 MD14G021300 | 2 | |
| Anchor point | many-to-many | MD16G001550 MD14G021300 MD06G018160 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G021300 MD06G018160 | 2 | ||
| Tree-based ortholog | many-to-many | MD14G021300 MD06G018160 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06446G00060 | 1 | |
| Anchor point | many-to-many | ME06446G00060 ME03604G00670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06446G00060 | 1 | ||
| Tree-based ortholog | many-to-1 | ME06446G00060 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT6G084200 | 1 | |
| Anchor point | many-to-many | MT6G084200 MT1G110570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G084200 | 1 | ||
| Tree-based ortholog | many-to-1 | MT6G084200 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G01260 | 1 | |
| Tree-based ortholog | many-to-many | OS02G33600 OS04G34050 OS08G01260 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00310G00090 PP00023G01030 PP00057G00400 ... | 5 | |
| Tree-based ortholog | many-to-many | PP00023G01010 PP00310G00090 PP00004G00780 ... | 5 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G22450 | 1 | |
| Anchor point | many-to-1 | PPE_005G22450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22450 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_005G22450 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29974G00110 | 1 | |
| Anchor point | many-to-many | RC30066G00020 RC29974G00110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29974G00110 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29974G00110 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL03G119410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G119410 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G119410 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST11G005740 | 1 | |
| Thellungiella parvula | Anchor point | many-to-many | TP5G23520 TP3G16470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16470 | 1 | ||
| Tree-based ortholog | many-to-1 | TP3G16470 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G03500 | 1 | |
| Anchor point | many-to-1 | TC0003G03500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G03500 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G03500 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G00370 | 1 | |
| Tree-based ortholog | many-to-1 | VV18G00370 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G00130 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G22040 | 1 |