Integrative Orthology Viewer: PT10G22440 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT03G04210 PT05G15820 PT06G16750 ... | 13 | |
Anchor point | PT08G03800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G22440 PT16G09440 PT07G03750 ... | 8 | ||
Tree-based ortholog | PT17G06640 PT08G21400 PT03G04210 ... | 13 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00003G00730 | 1 | |
Tree-based ortholog | many-to-many | ATR_00710G00010 ATR_00732G00010 ATR_00019G00770 | 3 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G00670 | 1 | |
Tree-based ortholog | many-to-many | AL2G00670 AL2G00650 AL2G00640 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G64290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G64295 | 1 | ||
Tree-based ortholog | many-to-many | AT1G64290 AT2G05360 AT1G64295 ... | 4 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G04610 | 1 | |
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G11770 | 1 | |
Tree-based ortholog | many-to-many | BR09G11770 BR04G10870 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G00510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G32380 | 1 | ||
Tree-based ortholog | many-to-many | CRU_002G00520 CRU_002G00510 CRU_007G32370 ... | 5 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00042G00210 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G15820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G15820 | 1 | ||
Tree-based ortholog | many-to-many | CL10G16020 CL10G15820 | 2 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00016G01810 | 1 | |
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G05120 | 1 | |
Tree-based ortholog | many-to-1 | CM00011G05120 | 1 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G33580 | 1 | |
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G09720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G09720 | 1 | ||
Tree-based ortholog | many-to-many | FV1G09720 FV1G09710 | 2 | ||
Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM09G03750 | 1 | |
Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR03G01850 GR12G03310 GR01G01460 | 3 | |
Tree-based ortholog | many-to-many | GR01G01460 GR03G01860 GR03G01850 ... | 4 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G029010 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD15G015440 MD15G015460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD15G015460 | 1 | ||
Tree-based ortholog | many-to-many | MD15G015460 MD15G015440 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05875G01000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05875G01000 | 1 | ||
Tree-based ortholog | many-to-1 | ME05875G01000 | 1 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G033410 | 1 | |
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G43530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G43530 | 1 | ||
Tree-based ortholog | many-to-1 | OS08G43530 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G22260 PPE_007G22270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G22270 | 1 | ||
Tree-based ortholog | many-to-many | PPE_007G22260 PPE_007G22270 | 2 | ||
Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29889G01080 | 1 | |
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G063790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G098570 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G029420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G029420 | 1 | ||
Tree-based ortholog | many-to-1 | ST02G029420 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-many | TP0G02610 TP1G34730 TP1G34780 | 3 | |
Tree-based ortholog | many-to-many | TP1G34780 TP1G34730 TP0G02610 ... | 5 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G11790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G07660 | 1 | ||
Tree-based ortholog | many-to-1 | TC0009G07660 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G04720 | 1 | |
Zea mays | Orthologous gene family | many-to-1 | ZM04G35030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G35030 | 1 | ||
Tree-based ortholog | many-to-1 | ZM04G35030 | 1 |