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Integrative Orthology Viewer:
PT02G08110
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT02G08110 | 1 |  |
| Anchor point | PT05G18010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT02G08110 PT05G18010 | 2 | ||
| Tree-based ortholog | PT05G18010 PT02G08110 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00017G02660 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00017G02660 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-many | AL2G26420 AL1G39280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G26420 | 1 | ||
| Tree-based ortholog | many-to-many | AL2G26420 AL1G39280 AL2G15440 | 3 | ||
| Arabidopsis thaliana | Anchor point | 1-to-many | AT1G44120 AT1G77460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G77460 | 1 | ||
| Tree-based ortholog | many-to-many | AT1G77460 AT1G44120 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G09540 | 1 | |
| Tree-based ortholog | many-to-1 | BV1G09540 | 1 | ||
| Brassica rapa | Anchor point | 1-to-1 | BR07G19250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G19250 | 1 | ||
| Tree-based ortholog | many-to-many | BR07G19250 BR05G19230 | 2 | ||
| Capsella rubella | Anchor point | 1-to-many | CRU_001G33270 CRU_002G23000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G23000 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_002G23000 CRU_001G33270 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00064G01110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00064G01110 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00064G01110 | 1 | ||
| Citrullus lanatus | Anchor point | 1-to-1 | CL11G09980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G09980 | 1 | ||
| Tree-based ortholog | many-to-1 | CL11G09980 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-1 | CS00004G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00004G00540 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00004G00540 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00013G01370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00013G01370 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00013G01370 | 1 | ||
| Eucalyptus grandis | Anchor point | 1-to-1 | EG0006G32540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G32540 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0006G32540 | 1 | ||
| Fragaria vesca | Anchor point | 1-to-1 | FV2G29890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G29890 | 1 | ||
| Tree-based ortholog | many-to-1 | FV2G29890 | 1 | ||
| Glycine max | Anchor point | 1-to-1 | GM14G24190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G26450 GM14G24190 | 2 | ||
| Tree-based ortholog | many-to-many | GM14G24190 GM02G26450 | 2 | ||
| Gossypium raimondii | Anchor point | 1-to-many | GR10G05170 GR09G24770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G24770 | 1 | ||
| Tree-based ortholog | many-to-many | GR09G24770 GR10G05170 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G020500 | 1 | |
| Malus domestica | Anchor point | 1-to-1 | MD15G026690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD08G016470 MD15G026690 | 2 | ||
| Tree-based ortholog | many-to-many | MD00G395930 MD15G026690 MD08G016470 | 3 | ||
| Manihot esculenta | Anchor point | 1-to-1 | ME07238G00430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07238G00430 | 1 | ||
| Tree-based ortholog | many-to-1 | ME07238G00430 | 1 | ||
| Medicago truncatula | Anchor point | 1-to-1 | MT1G029790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G029790 | 1 | ||
| Tree-based ortholog | many-to-1 | MT1G029790 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G08090 | 1 | |
| Tree-based ortholog | many-to-1 | OS11G08090 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00071G00710 PP00020G00220 | 2 | |
| Tree-based ortholog | many-to-many | PP00071G00710 PP00020G00220 | 2 | ||
| Prunus persica | Anchor point | 1-to-1 | PPE_001G49800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G49800 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_001G49800 | 1 | ||
| Ricinus communis | Anchor point | 1-to-1 | RC29648G00990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29648G00990 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29648G00990 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL06G060160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G060160 | 1 | ||
| Tree-based ortholog | many-to-1 | SL06G060160 | 1 | ||
| Solanum tuberosum | Anchor point | 1-to-1 | ST11G013390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G013390 | 1 | ||
| Tree-based ortholog | many-to-many | ST06G017800 ST11G013390 | 2 | ||
| Thellungiella parvula | Anchor point | 1-to-many | TP1G33410 TP5G32620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G32620 | 1 | ||
| Tree-based ortholog | many-to-many | TP5G32620 TP1G33410 | 2 | ||
| Theobroma cacao | Anchor point | 1-to-1 | TC0008G12480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G12480 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0008G12480 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV18G01900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G01900 | 1 | ||
| Tree-based ortholog | many-to-1 | VV18G01900 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G23090 | 1 | |
| Tree-based ortholog | many-to-1 | ZM02G23090 | 1 |