Integrative Orthology Viewer: PP00266G00280 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00043G00860 PP00235G00190 PP00266G00280 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | PP00043G00860 PP00336G00390 PP00266G00280 ... | 4 | ||
Tree-based ortholog | PP00266G00280 PP00033G01730 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00010G04230 ATR_00018G01150 ATR_00066G00170 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00018G01150 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00018G01150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G26630 AL1G34470 AL4G30630 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G34470 | 1 | ||
Tree-based ortholog | many-to-many | AL1G34470 AL6G32790 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G26850 AT1G33170 AT2G43200 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G33170 | 1 | ||
Tree-based ortholog | many-to-many | AT1G33170 AT4G10440 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G31230 BV0G31240 BV0G50300 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G11210 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G11210 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G05620 BR01G09270 BR02G26480 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR08G08340 BR00G05620 | 2 | ||
Tree-based ortholog | many-to-many | BR08G08340 BR00G05620 BR02G27360 ... | 4 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G23170 CRU_001G29930 CRU_004G27400 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G29930 | 1 | ||
Tree-based ortholog | many-to-many | CRU_001G29930 CRU_006G28050 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00006G04010 CP00018G02150 CP00111G00010 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00363G00040 | 1 | ||
Tree-based ortholog | many-to-1 | CP00363G00040 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G01040 CL05G02090 CL05G09020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G01040 | 1 | ||
Tree-based ortholog | many-to-1 | CL01G01040 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G02500 CS00003G04240 CS00009G03360 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00009G03360 | 1 | ||
Tree-based ortholog | many-to-1 | CS00009G03360 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G07910 CM00006G02270 CM00006G09980 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G07910 | 1 | ||
Tree-based ortholog | many-to-1 | CM00005G07910 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G01830 EG0001G23870 EG0002G04120 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G09500 | 1 | ||
Tree-based ortholog | many-to-1 | EG0005G09500 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G05610 FV0G41240 FV5G13460 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G41240 | 1 | ||
Tree-based ortholog | many-to-1 | FV0G41240 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G05580 GM02G11890 GM04G33740 ... | 17 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM05G36550 GM08G03000 | 2 | ||
Tree-based ortholog | many-to-many | GM08G03000 GM05G36550 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07180 GR01G17150 GR03G07270 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G12720 | 1 | ||
Tree-based ortholog | many-to-many | GR03G07270 GR04G12720 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G007650 LJ1G033630 LJ1G041610 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G047270 | 1 | ||
Tree-based ortholog | many-to-1 | LJ4G047270 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G055990 MD00G225490 MD00G361890 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G361890 MD08G011690 MD07G004490 | 3 | ||
Tree-based ortholog | many-to-many | MD00G191020 MD00G240550 MD00G361890 ... | 5 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00341G01130 ME03834G00100 ME03942G00520 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME08323G00030 | 1 | ||
Tree-based ortholog | many-to-1 | ME08323G00030 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G20870 MT1G101370 MT3G040370 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G100075 | 1 | ||
Tree-based ortholog | many-to-1 | MT8G100075 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G45310 OS03G26200 OS04G48230 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G36690 | 1 | ||
Tree-based ortholog | many-to-many | OS10G36690 OS06G01450 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G14640 PT01G45430 PT02G15440 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT11G14760 PT01G45430 | 2 | ||
Tree-based ortholog | many-to-many | PT11G14760 PT01G45430 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G28480 PPE_002G15430 PPE_002G27810 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G14510 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_005G14510 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29628G00010 RC30041G00050 RC30068G01220 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30068G01220 | 1 | ||
Tree-based ortholog | many-to-1 | RC30068G01220 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G009600 SL01G010870 SL03G026120 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G013740 | 1 | ||
Tree-based ortholog | many-to-1 | SL08G013740 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G014640 ST01G016130 ST01G030860 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G009200 | 1 | ||
Tree-based ortholog | many-to-1 | ST08G009200 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G21920 TP1G28670 TP2G11390 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G28670 | 1 | ||
Tree-based ortholog | many-to-many | TP1G28670 TP6G07020 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G36370 TC0002G34540 TC0003G08780 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G21300 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G21300 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G12160 VV02G02900 VV02G06190 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G00570 | 1 | ||
Tree-based ortholog | many-to-1 | VV02G06190 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G21930 ZM01G40390 ZM02G06950 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G40390 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G40390 ZM06G06610 | 2 |