Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ME02264G00290
(Manihot esculenta)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Manihot esculenta | Orthologous gene family | ME02264G00290 ME08757G00050 | 2 |  |
| Anchor point | ME08757G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ME02264G00290 ME08757G00050 | 2 | ||
| Tree-based ortholog | ME02264G00290 ME08757G00050 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00016G00960 | 1 | |
| Arabidopsis lyrata | Anchor point | 1-to-many | AL6G12970 AL1G29220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G29220 | 1 | ||
| Tree-based ortholog | many-to-1 | AL6G12970 | 1 | ||
| Arabidopsis thaliana | Anchor point | 1-to-many | AT1G28080 AT5G13250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G13250 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G13250 | 1 | ||
| Beta vulgaris | Anchor point | 1-to-1 | BV6G10710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G10710 | 1 | ||
| Tree-based ortholog | many-to-1 | BV6G10710 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR02G06270 | 1 | |
| Anchor point | 1-to-many | BR09G18160 BR03G05300 BR08G22020 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G21090 | 1 | ||
| Tree-based ortholog | many-to-many | BR10G21090 BR02G06270 BR03G05300 | 3 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_001G25440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G11100 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_006G11100 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00207G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00207G00050 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00207G00050 | 1 | ||
| Citrullus lanatus | Anchor point | 1-to-many | CL07G14230 CL06G01810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G14230 | 1 | ||
| Tree-based ortholog | many-to-many | CL06G01810 CL07G14230 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G05440 | 1 | |
| Anchor point | 1-to-1 | CS00003G05440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00003G05440 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00003G05440 | 1 | ||
| Cucumis melo | Anchor point | 1-to-many | CM00031G02760 CM00052G01290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00052G01290 | 1 | ||
| Tree-based ortholog | many-to-many | CM00052G01290 CM00031G02760 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G14660 | 1 | |
| Anchor point | 1-to-many | EG0007G14660 EG0002G29530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G14660 | 1 | ||
| Tree-based ortholog | many-to-many | EG0002G29530 EG0007G14660 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G13740 | 1 | |
| Anchor point | 1-to-1 | FV0G13740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G13740 | 1 | ||
| Tree-based ortholog | many-to-1 | FV0G13740 | 1 | ||
| Glycine max | Anchor point | 1-to-many | GM18G51871 GM08G28962 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G28962 GM18G51871 | 2 | ||
| Tree-based ortholog | many-to-many | GM18G51871 GM08G28962 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G19630 GR08G15620 | 2 | |
| Anchor point | 1-to-many | GR08G15620 GR12G12530 GR05G19630 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR05G19630 | 1 | ||
| Tree-based ortholog | many-to-many | GR05G19630 GR08G15620 GR12G12530 | 3 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G024090 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD04G006140 MD13G010420 | 2 | |
| Anchor point | 1-to-many | MD04G006140 MD13G010420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD13G010420 MD04G006140 | 2 | ||
| Tree-based ortholog | many-to-many | MD13G010420 MD04G006140 | 2 | ||
| Medicago truncatula | Anchor point | 1-to-1 | MT7G021270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G021270 | 1 | ||
| Tree-based ortholog | many-to-1 | MT7G021270 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS04G32510 OS01G70340 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G32510 | 1 | ||
| Tree-based ortholog | many-to-many | OS04G32510 OS12G29500 OS01G70340 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00448G00080 PP00154G00560 | 2 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06270 PT03G16480 | 2 | |
| Anchor point | 1-to-many | PT01G06270 PT03G16480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G06270 PT03G16480 | 2 | ||
| Tree-based ortholog | many-to-many | PT01G06270 PT03G16480 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G22720 | 1 | |
| Anchor point | 1-to-1 | PPE_001G22720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G22720 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_001G22720 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30128G04350 | 1 | |
| Anchor point | 1-to-1 | RC30128G04350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G04350 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30128G04350 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G009720 | 1 | |
| Anchor point | 1-to-1 | SL01G009720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G009720 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G009720 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G019100 | 1 | |
| Thellungiella parvula | Anchor point | 1-to-many | TP1G24260 TP6G30740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G30740 | 1 | ||
| Tree-based ortholog | many-to-1 | TP6G30740 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G19050 | 1 | |
| Anchor point | 1-to-1 | TC0002G19050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G19050 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0002G19050 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G01080 | 1 | |
| Anchor point | 1-to-1 | VV01G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G01080 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G01080 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM03G22120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G16970 | 1 | ||
| Tree-based ortholog | many-to-many | ZM02G16970 ZM03G22120 ZM08G28420 | 3 |