Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MD00G497860
(Malus domestica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Malus domestica | Orthologous gene family | MD00G497860 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | MD00G497860 | 1 | ||
| Tree-based ortholog | MD00G497860 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00602G00010 ATR_00135G00250 ATR_00254G00030 ... | 8 | |
| Tree-based ortholog | 1-to-many | ATR_00602G00010 ATR_00006G02220 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G19810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G19810 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL3G19810 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G18310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G18310 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G18310 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G11210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G11210 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV9G11210 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G25280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G25280 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR05G25270 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G17300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17300 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_003G17300 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP03060G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP03060G00020 CP04881G00010 | 2 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G16120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G16120 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL01G16120 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00043G01040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00043G01040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00043G01040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00049G00710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00049G00710 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00049G00710 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0003G32360 EG0011G19030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0011G19030 EG0003G32360 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0011G19030 EG0003G32360 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G28880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G28880 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV5G28880 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G16240 GM10G03570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G03570 GM02G16240 | 2 | ||
| Tree-based ortholog | 1-to-many | GM02G16240 GM10G03570 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G37900 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G37900 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ5G019040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G019040 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ5G019040 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12416G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | ME12416G00070 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G069120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G069120 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G069120 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS09G01700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G13720 | 1 | ||
| Tree-based ortholog | 1-to-many | OS03G13720 OS09G01700 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00069G00810 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00069G00810 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT12G04130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT12G04130 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT12G04130 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G03910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G03910 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G03910 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28582G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28582G00070 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G098450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G098450 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G098450 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G023580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G023580 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST01G023580 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G16450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16450 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP3G16450 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G01800 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G01800 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G25050 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM09G25050 | 1 |