Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GR00G00160
(Gossypium raimondii)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Gossypium raimondii | Orthologous gene family | GR00G00160 GR02G04520 GR02G05050 ... | 8 |  |
| Best-Hits-and-Inparalogs(BHI)family | GR02G04520 GR02G05050 GR02G19440 ... | 8 | ||
| Tree-based ortholog | GR02G05050 GR00G00160 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00114G00370 ATR_00041G01510 ATR_00041G01370 ... | 21 | |
| Tree-based ortholog | many-to-many | ATR_00041G01510 ATR_00041G01390 ATR_00041G01500 ... | 42 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G00210 | 1 | |
| Tree-based ortholog | many-to-1 | AL4G00210 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G21110 | 1 | |
| Tree-based ortholog | many-to-1 | AT2G21110 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV0G10540 BV0G10530 | 2 | |
| Tree-based ortholog | many-to-many | BV9G02620 BV9G02610 BV4G14990 ... | 16 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G44860 | 1 | |
| Tree-based ortholog | many-to-1 | BR09G44860 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G01680 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_004G01680 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00037G01740 | 1 | |
| Tree-based ortholog | many-to-1 | CP00037G01740 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G11900 | 1 | |
| Tree-based ortholog | many-to-1 | CL02G11900 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CS01422G00010 CS00520G00010 | 2 | |
| Tree-based ortholog | many-to-many | CS00520G00010 CS01422G00010 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00045G00790 | 1 | |
| Tree-based ortholog | many-to-1 | CM00045G00790 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0001G20880 EG0001G20860 EG0001G20850 ... | 6 | |
| Tree-based ortholog | many-to-many | EG0001G18550 EG0604G00020 EG0007G01690 ... | 27 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G06850 | 1 | |
| Tree-based ortholog | many-to-1 | FV2G06850 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G33300 GM03G30360 GM19G33290 | 3 | |
| Tree-based ortholog | many-to-many | GM12G03420 GM19G33310 GM19G33320 ... | 31 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G011710 | 1 | |
| Tree-based ortholog | many-to-many | LJ5G013320 LJ3G019730 LJ3G019740 ... | 5 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD05G019990 | 1 | |
| Tree-based ortholog | many-to-1 | MD05G019990 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03252G00050 | 1 | |
| Tree-based ortholog | many-to-1 | ME03252G00050 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT3G105630 MT3G105640 | 2 | |
| Tree-based ortholog | many-to-many | MT3G105640 MT3G105630 MT5G096120 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G59440 | 1 | |
| Tree-based ortholog | many-to-1 | OS03G59440 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00360G00020 | 1 | |
| Tree-based ortholog | many-to-many | PP00023G00270 PP00252G00020 PP00252G00060 ... | 7 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT08G06140 | 1 | |
| Tree-based ortholog | many-to-1 | PT08G06140 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G17960 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_008G17960 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28842G00420 | 1 | |
| Tree-based ortholog | many-to-1 | RC29756G00190 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G055190 SL00G131610 SL10G055230 | 3 | |
| Tree-based ortholog | many-to-many | SL10G008900 SL02G032030 SL02G032040 ... | 13 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G016300 | 1 | |
| Tree-based ortholog | many-to-many | ST10G009530 ST02G005980 ST02G005960 ... | 9 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G00250 | 1 | |
| Tree-based ortholog | many-to-1 | TP4G00250 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G06220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G06280 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0002G06220 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV08G08810 VV08G08830 | 2 | |
| Tree-based ortholog | many-to-many | VV08G08800 VV08G08810 VV08G08830 ... | 9 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G57130 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G57130 | 1 |