Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM16G01370
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM07G04790 GM16G01370 | 2 |  |
| Tree-based ortholog | GM16G01370 GM07G04790 | 2 | ||
| Anchor point | GM07G04790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM16G01370 GM07G04790 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00007G03330 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00007G03330 | 1 | ||
| Anchor point | 1-to-1 | ATR_00007G03330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00007G03330 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G14950 | 1 | |
| Tree-based ortholog | many-to-many | AL1G49250 AL3G14980 AL3G14950 | 3 | ||
| Anchor point | 1-to-many | AL1G49250 AL3G14950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G14950 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G14180 | 1 | |
| Tree-based ortholog | many-to-many | AT1G54060 AT3G14180 | 2 | ||
| Anchor point | 1-to-many | AT1G54060 AT3G14180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G14180 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G02450 | 1 | |
| Tree-based ortholog | many-to-1 | BV7G02450 | 1 | ||
| Anchor point | 1-to-1 | BV7G02450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G02450 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G34210 BR01G34230 | 2 | |
| Tree-based ortholog | many-to-many | BR08G01780 BR06G00770 BR01G34230 ... | 4 | ||
| Anchor point | 1-to-many | BR01G34210 BR08G01020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR01G34230 BR01G34210 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G13160 | 1 | |
| Tree-based ortholog | many-to-many | CRU_001G41230 CRU_003G13180 CRU_003G13160 | 3 | ||
| Anchor point | 1-to-many | CRU_003G13160 CRU_001G41230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G13160 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00019G01510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00019G01510 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G00920 | 1 | |
| Tree-based ortholog | many-to-1 | CL09G00920 | 1 | ||
| Anchor point | 1-to-1 | CL09G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G00920 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00366G00120 | 1 | |
| Tree-based ortholog | many-to-1 | CS00366G00120 | 1 | ||
| Anchor point | 1-to-1 | CS00366G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00366G00120 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00067G01090 | 1 | |
| Tree-based ortholog | many-to-1 | CM00067G01090 | 1 | ||
| Anchor point | 1-to-1 | CM00067G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00067G01090 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G22690 | 1 | |
| Tree-based ortholog | many-to-1 | EG0010G22690 | 1 | ||
| Anchor point | 1-to-1 | EG0010G22690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G22690 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G16320 | 1 | |
| Tree-based ortholog | many-to-1 | FV0G16320 | 1 | ||
| Anchor point | 1-to-1 | FV0G16320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G16320 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G14480 GR10G23570 | 2 | |
| Tree-based ortholog | many-to-many | GR09G14480 GR10G23570 | 2 | ||
| Anchor point | 1-to-many | GR09G14480 GR10G23570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G14480 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G036020 | 1 | |
| Tree-based ortholog | many-to-1 | LJ3G036020 | 1 | ||
| Anchor point | 1-to-1 | LJ3G036020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G036020 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD09G017020 | 1 | |
| Tree-based ortholog | many-to-many | MD09G017020 MD00G167040 | 2 | ||
| Anchor point | 1-to-1 | MD09G017020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD09G017020 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME05875G01360 ME06700G00220 | 2 | |
| Tree-based ortholog | many-to-many | ME06340G00030 ME10813G00100 ME05875G01360 ... | 4 | ||
| Anchor point | 1-to-many | ME06700G00220 ME05875G01360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06700G00220 ME05875G01360 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G022290 | 1 | |
| Tree-based ortholog | many-to-1 | MT8G022290 | 1 | ||
| Anchor point | 1-to-1 | MT8G022290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G022290 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G36790 | 1 | |
| Tree-based ortholog | many-to-many | OS02G35690 OS04G36790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G36790 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00523G00010 | 1 | |
| Tree-based ortholog | many-to-many | PP00407G00120 PP00407G00050 PP00039G01150 ... | 13 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00065G01130 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02600 PT03G19880 PT03G20000 | 3 | |
| Tree-based ortholog | many-to-many | PT03G20000 PT03G19880 PT01G02600 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT03G20000 PT03G19880 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G02270 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_003G02270 | 1 | ||
| Anchor point | 1-to-1 | PPE_003G02270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G02270 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29727G00110 | 1 | |
| Tree-based ortholog | many-to-1 | RC29727G00110 | 1 | ||
| Anchor point | 1-to-1 | RC29727G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29727G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G122030 | 1 | |
| Tree-based ortholog | many-to-1 | SL03G122030 | 1 | ||
| Anchor point | 1-to-1 | SL03G122030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G122030 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G034920 | 1 | |
| Tree-based ortholog | many-to-1 | ST03G034920 | 1 | ||
| Anchor point | 1-to-1 | ST03G034920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G034920 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G12430 | 1 | |
| Tree-based ortholog | many-to-many | TP1G40500 TP3G12460 TP3G12430 | 3 | ||
| Anchor point | 1-to-many | TP1G40500 TP3G12430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G12430 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G12570 | 1 | |
| Tree-based ortholog | many-to-1 | TC0006G12570 | 1 | ||
| Anchor point | 1-to-1 | TC0006G12570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G12570 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV09G01950 | 1 | |
| Tree-based ortholog | many-to-1 | VV09G01950 | 1 | ||
| Anchor point | 1-to-1 | VV09G01950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV09G01950 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G14140 ZM10G17410 | 2 | |
| Tree-based ortholog | many-to-many | ZM05G31250 ZM08G19250 ZM02G14140 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G17410 ZM02G14140 | 2 |