Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM04G02240
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM04G02240 GM06G02300 | 2 |  |
| Tree-based ortholog | GM06G02300 GM04G02240 | 2 | ||
| Anchor point | GM06G02300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM04G02240 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00001G01210 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00001G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G01210 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G21370 AL2G24980 | 2 | |
| Tree-based ortholog | many-to-many | AL1G21370 AL2G24980 | 2 | ||
| Anchor point | 1-to-many | AL2G24980 AL1G21370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G21370 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20340 AT1G76100 | 2 | |
| Tree-based ortholog | many-to-many | AT1G20340 AT1G76100 | 2 | ||
| Anchor point | 1-to-many | AT1G20340 AT1G76100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G20340 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G36130 | 1 | |
| Tree-based ortholog | many-to-1 | BV0G36130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G36130 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G10450 BR08G25180 | 2 | |
| Tree-based ortholog | many-to-many | BR08G25180 BR06G14680 BR07G10450 ... | 4 | ||
| Anchor point | 1-to-many | BR07G31300 BR07G10450 BR08G25180 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G25180 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G19030 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_001G19030 | 1 | ||
| Anchor point | 1-to-1 | CRU_001G19030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G19030 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00026G02580 | 1 | |
| Tree-based ortholog | many-to-1 | CP00026G02580 | 1 | ||
| Anchor point | 1-to-1 | CP00026G02580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G02580 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G09110 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G09110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G09110 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G16680 | 1 | |
| Tree-based ortholog | many-to-1 | CL05G16680 | 1 | ||
| Anchor point | 1-to-1 | CL05G16680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G16680 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G06100 | 1 | |
| Tree-based ortholog | many-to-1 | CS00002G06100 | 1 | ||
| Anchor point | 1-to-1 | CS00002G06100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G06100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM01596G04450 | 1 | |
| Tree-based ortholog | many-to-1 | CM01596G04450 | 1 | ||
| Anchor point | 1-to-1 | CM01596G04450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G04450 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G37840 | 1 | |
| Tree-based ortholog | many-to-1 | FV2G37840 | 1 | ||
| Anchor point | 1-to-1 | FV2G37840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G37840 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR09G19080 | 1 | |
| Tree-based ortholog | many-to-1 | GR09G19080 | 1 | ||
| Anchor point | 1-to-1 | GR09G19080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G19080 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G030240 | 1 | |
| Tree-based ortholog | many-to-1 | LJ1G030240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G030240 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD12G014320 | 1 | |
| Tree-based ortholog | many-to-many | MD12G014320 MD00G323000 | 2 | ||
| Anchor point | 1-to-1 | MD12G014320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G014320 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME09683G00030 | 1 | |
| Tree-based ortholog | many-to-1 | ME09683G00030 | 1 | ||
| Anchor point | 1-to-1 | ME09683G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09683G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G114850 | 1 | |
| Tree-based ortholog | many-to-1 | MT3G114850 | 1 | ||
| Anchor point | 1-to-1 | MT3G114850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G114850 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G01210 | 1 | |
| Tree-based ortholog | many-to-1 | OS06G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G01210 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G03930 | 1 | |
| Tree-based ortholog | many-to-1 | OL09G03930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G03930 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00003G02050 PP00027G00490 PP00254G00050 | 3 | |
| Tree-based ortholog | many-to-many | PP00027G00490 PP00003G02050 PP00254G00050 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G02050 PP00027G00490 PP00254G00050 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G01600 PT05G24610 | 2 | |
| Tree-based ortholog | many-to-many | PT05G24610 PT02G01600 | 2 | ||
| Anchor point | 1-to-many | PT02G01600 PT05G24610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G01600 PT05G24610 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G36740 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_001G36740 | 1 | ||
| Anchor point | 1-to-1 | PPE_001G36740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G36740 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30170G06110 | 1 | |
| Tree-based ortholog | many-to-1 | RC30170G06110 | 1 | ||
| Anchor point | 1-to-1 | RC30170G06110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G06110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G082010 | 1 | |
| Tree-based ortholog | many-to-1 | SL04G082010 | 1 | ||
| Anchor point | 1-to-1 | SL04G082010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G082010 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G035400 | 1 | |
| Tree-based ortholog | many-to-1 | ST04G035400 | 1 | ||
| Anchor point | 1-to-1 | ST04G035400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G035400 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18060 TP5G31220 | 2 | |
| Tree-based ortholog | many-to-many | TP1G18060 TP5G31220 | 2 | ||
| Anchor point | 1-to-many | TP1G18060 TP5G31220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G18060 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G05050 | 1 | |
| Tree-based ortholog | many-to-1 | TC0008G05050 | 1 | ||
| Anchor point | 1-to-1 | TC0008G05050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G05050 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV18G01040 | 1 | |
| Tree-based ortholog | many-to-1 | VV18G01040 | 1 | ||
| Anchor point | 1-to-1 | VV18G01040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G01040 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G06460 | 1 | |
| Tree-based ortholog | many-to-1 | ZM06G06460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G06460 | 1 |