Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00019G01960
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00019G01960 | 1 |  |
| Tree-based ortholog | CS00019G01960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00019G01960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00154G00590 | 1 | |
| Anchor point | N/A | ATR_00154G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00154G00590 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL2G17490 | 1 | |
| Anchor point | N/A | AL2G17490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G09770 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT1G69240 AT1G26360 | 2 | |
| Anchor point | N/A | AT1G26360 AT1G69240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G26360 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G01530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G01530 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G19700 BR08G23190 | 2 | |
| Anchor point | N/A | BR02G19700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G31600 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_002G14870 CRU_001G23670 | 2 | |
| Anchor point | N/A | CRU_002G14870 CRU_001G23670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G23670 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00014G01960 | 1 | |
| Anchor point | N/A | CP00014G01960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00471G00020 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL11G14070 CL07G17430 | 2 | |
| Anchor point | N/A | CL11G14070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G17430 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00051G00800 CM00013G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00013G00030 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G18690 | 1 | |
| Anchor point | N/A | EG0007G18690 EG0009G17120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G12170 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G03940 | 1 | |
| Anchor point | N/A | FV6G42290 FV0G03940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G03940 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G27210 GM18G50420 | 2 | |
| Anchor point | N/A | GM18G50420 GM08G27210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G27210 GM18G50420 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR07G07040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G07040 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G028890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G028890 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD13G004000 | 1 | |
| Anchor point | N/A | MD13G004000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G279070 MD17G005250 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04489G00120 | 1 | |
| Anchor point | N/A | ME04489G00120 ME04043G01990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04489G00120 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G015220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G015220 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G41230 | 1 | |
| Anchor point | N/A | OS07G41230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G41230 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00035G01170 PP00112G00960 PP00156G00120 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00112G00960 PP00156G00120 PP00035G01170 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT08G09690 | 1 | |
| Tree-based ortholog | 1-to-1 | PT08G09690 | 1 | ||
| Anchor point | N/A | PT17G09510 PT04G11650 PT08G09690 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G09690 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G30020 | 1 | |
| Anchor point | N/A | PPE_003G23150 PPE_001G30020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G30020 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30174G04890 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30174G04890 | 1 | ||
| Anchor point | N/A | RC30174G04890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G04890 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL05G012180 | 1 | |
| Anchor point | N/A | SL05G012180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G012180 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST05G005850 | 1 | |
| Anchor point | N/A | ST02G033880 ST05G005850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G033880 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP5G24290 TP1G22330 | 2 | |
| Anchor point | N/A | TP1G22330 TP5G24290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G18050 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G32840 | 1 | |
| Anchor point | N/A | TC0002G32840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G32840 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV01G10550 | 1 | |
| Anchor point | N/A | VV01G10550 VV14G13110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G13110 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G26610 ZM02G38690 | 2 | |
| Anchor point | N/A | ZM07G26610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G38690 ZM07G26610 | 2 |