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Integrative Orthology Viewer:
CRU_005G19540
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_004G19950 CRU_005G19540 | 2 |  |
| Tree-based ortholog | CRU_005G19540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G19540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G03340 ATR_00077G02040 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00077G02040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00077G02040 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G25010 AL5G24250 | 2 | |
| Tree-based ortholog | 1-to-1 | AL5G24250 | 1 | ||
| Anchor point | N/A | AL5G24250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24250 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G38630 AT3G54190 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G54190 | 1 | ||
| Anchor point | N/A | AT3G54190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G54190 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G00500 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G00500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G00500 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G04850 BR09G35210 | 2 | |
| Tree-based ortholog | 1-to-many | BR04G04850 BR09G35210 | 2 | ||
| Anchor point | N/A | BR04G04850 BR09G35210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35210 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00019G00340 CP00060G00290 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00060G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G00340 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G06080 | 1 | |
| Tree-based ortholog | 1-to-1 | CL04G06080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G06080 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00024G00410 CS00036G00630 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00036G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00036G00630 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00076G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00076G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00076G00730 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G06740 EG0007G25400 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0001G06740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G06740 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV6G07870 FV7G31600 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G07870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G07870 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G38500 GM04G40290 GM06G14500 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM18G45110 GM09G40710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G40290 GM06G14500 GM02G38500 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G29180 GR13G01010 | 2 | |
| Tree-based ortholog | 1-to-many | GR09G29180 GR13G01010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G01010 GR09G29180 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G204350 MD01G015970 MD04G014510 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD12G020220 MD04G014510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G020220 MD04G014510 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03614G00300 ME11297G00030 | 2 | |
| Tree-based ortholog | 1-to-many | ME03614G00300 ME11297G00030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11297G00030 ME03614G00300 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G093520 MT4G102610 MT5G068570 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT4G102580 MT4G102610 MT7G074450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G093520 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G60200 OS02G54090 OS05G40410 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OS02G06460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G40410 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00021G01950 PP00034G01020 | 2 | |
| Tree-based ortholog | 1-to-many | PP00021G01950 PP00065G00430 PP00034G01020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00021G01950 PP00034G01020 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G11300 PT13G09170 PT13G09180 ... | 5 | |
| Tree-based ortholog | 1-to-many | PT06G11300 PT16G14260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G11300 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G25660 PPE_006G30590 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_006G30590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G25660 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30073G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30073G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30073G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G095260 SL06G048480 | 2 | |
| Tree-based ortholog | 1-to-many | SL06G048480 SL03G095260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G095260 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G018470 ST06G014950 | 2 | |
| Tree-based ortholog | 1-to-many | ST06G014950 ST03G018470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G018470 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G20970 TP5G08210 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G08210 | 1 | ||
| Anchor point | N/A | TP5G08210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08210 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G06400 TC0010G18560 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0004G06400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G18560 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV08G04630 VV13G10890 | 2 | |
| Tree-based ortholog | 1-to-1 | VV08G04630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G10890 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G18400 ZM05G42520 ZM06G26900 ... | 4 | |
| Tree-based ortholog | 1-to-many | ZM08G18310 ZM06G26900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G18310 ZM06G26900 | 2 |