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Integrative Orthology Viewer:
CRU_001G28160
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G28160 | 1 |  |
| Tree-based ortholog | CRU_001G28160 | 1 | ||
| Anchor point | CRU_008G03270 CRU_007G20250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_001G28160 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00019G01470 ATR_00019G01480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00209G00070 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL8G04490 AL8G04450 AL7G22490 | 3 | |
| Anchor point | many-to-many | AL7G22490 AL8G04450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL8G04490 AL8G04450 | 2 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT1G31130 | 1 | |
| Anchor point | many-to-many | AT5G44860 AT1G31130 AT4G19950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G31130 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G73850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G73850 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR07G05560 BR08G09680 BR09G27580 | 3 | |
| Tree-based ortholog | 1-to-1 | BR09G27580 | 1 | ||
| Anchor point | many-to-many | BR09G27580 BR08G09680 BR07G05560 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G27580 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00030G01240 | 1 | |
| Anchor point | many-to-1 | CP00030G01240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00030G01240 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL03G04170 | 1 | |
| Anchor point | many-to-1 | CL03G04170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G04170 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00008G02010 | 1 | |
| Anchor point | many-to-1 | CS00008G02010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G02010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00001G05130 | 1 | |
| Anchor point | many-to-1 | CM00001G05130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G05130 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0010G27000 EG0006G34290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G40330 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G10940 | 1 | |
| Anchor point | many-to-1 | FV3G10940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G10940 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-1 | GM05G26160 | 1 | |
| Anchor point | many-to-1 | GM05G26160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G26160 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G04870 GR05G26760 | 2 | |
| Anchor point | many-to-1 | GR08G04870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G26760 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G003700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G003700 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD05G009000 MD10G019230 | 2 | |
| Anchor point | many-to-many | MD05G009000 MD10G019230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G009000 MD10G019230 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04758G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04758G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G029440 | 1 | |
| Tree-based ortholog | 1-to-many | MT3G014430 MT7G021620 MT4G096890 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G021620 MT4G096890 | 2 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G58620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G58620 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00054G01330 PP00103G00360 PP00249G00400 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00263G00160 PP00103G00360 PP00054G01330 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00103G00360 PP00263G00160 PP00054G01330 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT15G12560 PT12G12580 | 2 | |
| Anchor point | many-to-1 | PT15G12560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G12560 PT12G12580 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G09950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G09950 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29840G00200 | 1 | |
| Anchor point | many-to-1 | RC29840G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29840G00200 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G080910 SL02G031830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G031830 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST01G028280 ST02G006100 | 2 | |
| Anchor point | many-to-1 | ST01G028280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G006100 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G26960 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G26960 | 1 | ||
| Anchor point | many-to-many | TP2G09690 TP7G18390 TP1G26960 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G26960 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G00740 | 1 | |
| Anchor point | many-to-1 | TC0002G00740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G00740 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV01G09470 | 1 | |
| Anchor point | many-to-1 | VV01G09470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G09470 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G33480 ZM03G29430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G29430 ZM08G33480 | 2 |