Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CM00056G00510
(Cucumis melo)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Cucumis melo | Orthologous gene family | CM00056G00510 | 1 |  |
| Tree-based ortholog | CM00056G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CM00056G00510 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00099G01310 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00099G01310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G01310 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G15190 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G01740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G15190 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G14440 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G02540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G14440 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G21970 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G21970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G21970 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G09970 BR09G48230 | 2 | |
| Tree-based ortholog | 1-to-1 | BR02G30620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G48230 BR06G09970 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G13510 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G01430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G01430 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00173G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00173G00050 | 1 | ||
| Anchor point | N/A | CP00173G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00173G00050 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G18840 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G18840 | 1 | ||
| Anchor point | N/A | CL11G18840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G18840 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00653G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00653G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00653G00040 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G00510 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G26720 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G26720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G26720 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G40190 GM17G00590 | 2 | |
| Tree-based ortholog | 1-to-many | GM17G00590 GM07G40190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G00590 GM07G40190 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G09090 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G09090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G09090 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G017160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G030870 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD08G022950 MD15G036450 | 2 | |
| Tree-based ortholog | 1-to-1 | MD15G036450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G022950 MD15G036450 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME09151G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | ME09151G00240 | 1 | ||
| Anchor point | N/A | ME09151G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09151G00240 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G134580 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G134580 | 1 | ||
| Anchor point | N/A | MT4G134580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G134580 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS11G13930 | 1 | |
| Tree-based ortholog | 1-to-1 | OS11G13930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G13930 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00230G00360 PP00165G00520 PP00153G00520 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00012G00020 ... | 7 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT03G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | PT04G22960 | 1 | ||
| Anchor point | N/A | PT04G22960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G00040 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G53060 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G53060 | 1 | ||
| Anchor point | N/A | PPE_001G53060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G53060 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29806G00520 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29806G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29806G00520 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G102980 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G102980 | 1 | ||
| Anchor point | N/A | SL01G102980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G102980 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G039980 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G039980 | 1 | ||
| Anchor point | N/A | ST01G039980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G039980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G12810 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G13770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G13770 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G02040 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0006G02040 | 1 | ||
| Anchor point | N/A | TC0006G02040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G02040 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV12G06360 VV18G09000 | 2 | |
| Tree-based ortholog | 1-to-many | VV12G06360 VV14G02170 VV18G11970 | 3 | ||
| Anchor point | N/A | VV12G06360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G02080 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM04G03470 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM04G03470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G03470 | 1 |