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Integrative Orthology Viewer:
BR09G53450
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR09G53450 | 1 |  |
| Tree-based ortholog | BR09G53450 | 1 | ||
| Anchor point | BR10G03240 BR03G16670 BR01G08140 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR09G53450 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00039G01570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00109G01200 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL1G03950 | 1 | |
| Anchor point | many-to-many | AL4G18530 AL1G03950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03950 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT1G04550 | 1 | |
| Anchor point | many-to-many | AT2G33310 AT4G29080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G04550 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G19340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G19340 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G03450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G03450 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00059G00080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00129G00230 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL06G07150 CL05G04230 | 2 | |
| Anchor point | many-to-many | CL05G04230 CL06G07150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07150 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00675G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00675G00010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00057G00780 CM00006G04720 | 2 | |
| Anchor point | many-to-many | CM00006G04720 CM00057G00780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00057G00780 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G23610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G23610 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G37120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G37120 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM13G18910 GM10G04610 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G04610 GM13G18910 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR11G18010 | 1 | |
| Anchor point | many-to-many | GR06G25090 GR07G15000 GR04G22250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G25090 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G069810 LJ5G038690 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G022540 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD16G010770 MD00G129470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G010770 MD00G129470 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME10563G01820 ME01551G00420 | 2 | |
| Anchor point | many-to-1 | ME01551G00420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10563G01820 ME01551G00420 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G069495 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G069495 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G57250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G57250 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00073G00060 PP00184G00110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00073G00060 PP00184G00110 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT10G06520 PT08G17240 | 2 | |
| Anchor point | many-to-1 | PT10G06520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G17240 PT10G06520 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G04800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G04800 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30008G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30008G00150 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL12G096980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G096980 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST12G029500 ST09G026860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G026860 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G03380 | 1 | |
| Anchor point | many-to-many | TP1G03380 TP4G15620 TP7G27020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G03380 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G26780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G26780 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV05G09040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G09040 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM04G25070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G25070 | 1 |