Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR09G38530
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR04G02360 BR09G38530 | 2 |  |
| Anchor point | BR04G25360 BR03G21050 BR04G02360 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR09G38530 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00041G00170 | 1 | |
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G28740 | 1 | |
| Anchor point | many-to-many | AL5G28740 AL4G29690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G28740 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G58190 | 1 | |
| Anchor point | many-to-many | AT2G42430 AT1G06280 AT3G58190 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G58190 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G13520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G13520 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G23670 | 1 | |
| Anchor point | many-to-many | CRU_005G23660 CRU_001G05310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G23670 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00050G00410 | 1 | |
| Anchor point | many-to-1 | CP00050G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00050G00410 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G02100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G02100 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00022G00130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00022G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00018G01310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00018G01310 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G12620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12620 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G08640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G08640 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G31860 GM10G04050 GM13G18210 ... | 4 | |
| Anchor point | many-to-many | GM02G27230 GM02G46161 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G18210 GM10G04050 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G25170 GR07G14450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR04G07330 GR04G07320 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G061420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G061420 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G114430 | 1 | |
| Manihot esculenta | Orthologous gene family | many-to-many | ME06715G00200 ME09880G00140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06715G00200 ME09880G00140 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G070205 MT7G096610 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G096610 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G44940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G44940 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00035G01860 PP00061G01210 PP00157G00190 ... | 6 | |
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT02G04110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G04110 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_008G24170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G24170 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28428G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28428G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G066270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G066270 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G019290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G019290 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G04520 | 1 | |
| Anchor point | many-to-many | TP5G04520 TP4G24570 TP1G05090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G04520 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G26000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G26000 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV07G10640 | 1 | |
| Anchor point | many-to-1 | VV16G03160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G10640 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G03680 ZM09G28480 | 2 | |