Integrative Orthology Viewer: BR06G22790 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G36900 BR02G40760 BR06G22790 ... | 4 | |
Tree-based ortholog | BR02G40760 BR06G22790 | 2 | ||
Anchor point | BR02G40760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR06G22790 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G01550 ATR_00029G01820 | 2 | |
Tree-based ortholog | many-to-many | ATR_00007G01550 ATR_00029G01820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G01550 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G34810 AL6G25310 AL6G25320 ... | 4 | |
Tree-based ortholog | many-to-1 | AL8G31640 | 1 | ||
Anchor point | 1-to-1 | AL8G31640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G31640 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G25250 AT5G25260 AT5G64870 | 3 | |
Tree-based ortholog | many-to-1 | AT5G64870 | 1 | ||
Anchor point | 1-to-1 | AT5G64870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G64870 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G11200 BV2G11210 BV9G14960 | 3 | |
Tree-based ortholog | many-to-many | BV2G11210 BV2G11200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G11210 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G30260 CRU_006G22390 CRU_006G22400 ... | 4 | |
Tree-based ortholog | many-to-1 | CRU_008G24950 | 1 | ||
Anchor point | 1-to-1 | CRU_008G24950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G24950 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00187G00230 | 1 | |
Tree-based ortholog | many-to-1 | CP00187G00230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00187G00230 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G13270 | 1 | |
Tree-based ortholog | many-to-1 | CL08G13270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G13270 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00051G01010 CS00051G01020 | 2 | |
Tree-based ortholog | many-to-many | CS00051G01020 CS00051G01010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00051G01010 CS00051G01020 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00014G06440 | 1 | |
Tree-based ortholog | many-to-1 | CM00014G06440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G06440 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G00320 EG0010G00330 EG0010G00340 | 3 | |
Tree-based ortholog | many-to-many | EG0010G00340 EG0010G00320 EG0010G00330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G00320 EG0010G00340 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G30850 FV2G30860 FV6G09050 | 3 | |
Tree-based ortholog | many-to-many | FV2G30860 FV2G30850 FV6G09050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G09050 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM06G06930 | 1 | |
Tree-based ortholog | many-to-1 | GM06G06930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G06930 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G13560 | 1 | |
Tree-based ortholog | many-to-1 | GR06G13560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G13560 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G003320 MD15G006680 MD15G006690 ... | 4 | |
Tree-based ortholog | many-to-many | MD15G006680 MD01G003320 MD15G006700 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G006700 MD15G006690 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME00847G01940 | 1 | |
Tree-based ortholog | many-to-1 | ME00847G01940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00847G01940 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G071130 MT1G073400 MT1G083190 ... | 10 | |
Tree-based ortholog | many-to-many | MT1G083190 MT3G106420 MT3G106470 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G083190 MT3G106480 MT1G071130 ... | 8 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS10G34040 OS10G34130 OS10G34150 | 3 | |
Tree-based ortholog | many-to-many | OS10G34040 OS10G34150 OS10G34130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G34040 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00047G01050 | 1 | |
Tree-based ortholog | many-to-1 | PP00047G01050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00047G01050 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G25890 PT18G02290 | 2 | |
Tree-based ortholog | many-to-many | PT18G02290 PT06G25890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G25890 PT18G02290 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G49010 PPE_001G49020 PPE_001G49030 ... | 4 | |
Tree-based ortholog | many-to-many | PPE_001G49020 PPE_001G49030 PPE_001G49010 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G49020 PPE_001G49010 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29827G00920 | 1 | |
Tree-based ortholog | many-to-1 | RC29827G00920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29827G00920 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G089910 SL03G005420 SL03G117250 ... | 4 | |
Tree-based ortholog | many-to-1 | SL06G065850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G065850 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G029150 ST03G005610 ST03G030710 ... | 5 | |
Tree-based ortholog | many-to-1 | ST06G024910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G024910 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G22290 TP2G27950 | 2 | |
Tree-based ortholog | many-to-1 | TP2G27950 | 1 | ||
Anchor point | 1-to-1 | TP2G27950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G27950 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G15390 TC0009G01920 | 2 | |
Tree-based ortholog | many-to-many | TC0005G15390 TC0009G01920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G15390 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G12780 VV09G08250 | 2 | |
Tree-based ortholog | many-to-1 | VV04G12780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G12780 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G09910 | 1 | |
Tree-based ortholog | many-to-1 | ZM05G09910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G09910 | 1 |