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Integrative Orthology Viewer:
BR05G08720
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR05G08720 | 1 |  |
| Tree-based ortholog | BR04G21700 BR03G17910 BR05G08720 | 3 | ||
| Anchor point | BR03G17910 BR04G21700 BR02G01470 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR05G08720 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00041G00030 ATR_00040G01120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G01120 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G21720 | 1 | |
| Anchor point | many-to-many | AL5G22680 AL4G21720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G21720 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT3G60890 AT2G45450 | 2 | |
| Anchor point | many-to-1 | AT3G52770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52770 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV7G12260 | 1 | |
| Anchor point | many-to-1 | BV7G12260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12260 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G17480 | 1 | |
| Anchor point | many-to-many | CRU_005G18100 CRU_004G17480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G18100 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00005G00360 | 1 | |
| Anchor point | many-to-1 | CP00005G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G00360 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL10G17170 | 1 | |
| Anchor point | many-to-1 | CL10G17170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G17170 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00056G00760 | 1 | |
| Anchor point | many-to-1 | CS00056G00760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00056G00760 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00011G03910 | 1 | |
| Anchor point | many-to-1 | CM00011G03910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G03910 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0001G12320 | 1 | |
| Anchor point | many-to-many | EG0001G12320 EG0011G16880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G12320 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV6G18450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G18450 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM13G22000 GM10G08310 GM03G35210 ... | 4 | |
| Anchor point | many-to-many | GM13G22000 GM10G08310 GM19G37870 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G22000 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR09G40410 GR06G15600 GR08G09890 | 3 | |
| Anchor point | many-to-many | GR09G40410 GR06G15600 GR02G24080 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G15600 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ1G033100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G033100 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G184170 MD07G008830 MD02G019260 | 3 | |
| Manihot esculenta | Tree-based ortholog | many-to-many | ME06550G00670 ME01664G00160 | 2 | |
| Anchor point | many-to-1 | ME06550G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06550G00670 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT2G039220 MT2G439240 MT2G439220 ... | 6 | |
| Anchor point | many-to-many | MT1G060310 MT7G104410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G060310 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS04G33560 OS02G32850 | 2 | |
| Anchor point | many-to-many | OS04G33560 OS02G32850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G33560 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT06G08320 PT08G02180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G08320 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-many | PPE_004G27410 PPE_007G13530 | 2 | |
| Anchor point | many-to-1 | PPE_007G13530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G13530 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29625G00150 | 1 | |
| Anchor point | many-to-1 | RC29625G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29625G00150 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL09G009620 SL01G005180 SL11G007100 | 3 | |
| Anchor point | many-to-many | SL09G009620 SL11G007100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G007100 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST09G010510 ST01G005350 ST11G011680 | 3 | |
| Anchor point | many-to-1 | ST11G011680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G011680 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G18540 | 1 | |
| Anchor point | many-to-many | TP4G18540 TP5G09560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G18540 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0010G10450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G10450 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-many | VV08G11840 VV13G02210 | 2 | |
| Anchor point | many-to-1 | VV08G11840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G11840 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM02G16150 ZM10G16090 ZM05G29740 | 3 | |
| Anchor point | many-to-many | ZM02G16150 ZM05G29740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G16150 ZM10G16090 | 2 |